BLASTX nr result

ID: Bupleurum21_contig00039340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039340
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520708.1| conserved hypothetical protein [Ricinus comm...   117   1e-24
emb|CBI32285.3| unnamed protein product [Vitis vinifera]              115   4e-24
emb|CAN67843.1| hypothetical protein VITISV_016666 [Vitis vinifera]   115   4e-24
emb|CAA09792.1| NDX2 homeobox protein [Lotus japonicus]               109   3e-22
ref|XP_003597319.1| NDX1 homeobox protein [Medicago truncatula] ...   108   6e-22

>ref|XP_002520708.1| conserved hypothetical protein [Ricinus communis]
           gi|223540093|gb|EEF41670.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 957

 Score =  117 bits (293), Expect = 1e-24
 Identities = 63/138 (45%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
 Frame = -1

Query: 411 STHATILHSTIMACSLYFLQELVYPSWPGLVFPEWPELVGVLVKYPQGDRFMDAAFAAIR 232
           S+   +LH  ++ACSLY L         G +   W +LV VL+ +P+ D FMDAAF A+ 
Sbjct: 142 SSSVPLLHPALVACSLYLLT--------GCISSHWQDLVQVLLAHPKVDVFMDAAFGAVL 193

Query: 231 VDVQLLQMMLSFPAEAPCCGSSTSDLEMIAHQCQQCEASLQYMQTLCQHKLFQDFLVKHK 52
           V ++ LQ+ LS P       SS +  +++ + CQQCEASLQ++Q+LCQ KLF++ L+++K
Sbjct: 194 VAIRFLQVKLSAPYTDFHMRSSPTAEQIVNYLCQQCEASLQFLQSLCQQKLFRERLLRNK 253

Query: 51  E-CGKAGVLFLARCVLKL 1
           E CGK GVLFLA+ +LKL
Sbjct: 254 ELCGKGGVLFLAQAILKL 271


>emb|CBI32285.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  115 bits (288), Expect = 4e-24
 Identities = 61/139 (43%), Positives = 91/139 (65%), Gaps = 1/139 (0%)
 Frame = -1

Query: 414 ISTHATILHSTIMACSLYFLQELVYPSWPGLVFPEWPELVGVLVKYPQGDRFMDAAFAAI 235
           +S+HA +LHS ++ACSLY L         G +  +W +L  VL  +P+ D FM+AAF A+
Sbjct: 141 LSSHAPLLHSALVACSLYLLT--------GFISTQWQDLGHVLTAHPKVDIFMEAAFRAV 192

Query: 234 RVDVQLLQMMLSFPAEAPCCGSSTSDLEMIAHQCQQCEASLQYMQTLCQHKLFQDFLVKH 55
            + ++ LQ+ LS    A C    +   +++   CQQCEASLQ++Q+LCQ K+F++ L+K+
Sbjct: 193 HLSIRSLQIKLS----AQCVDFPSPAEQVVNSLCQQCEASLQFLQSLCQQKMFRERLLKN 248

Query: 54  KE-CGKAGVLFLARCVLKL 1
           KE CGK GVL LA+ +LKL
Sbjct: 249 KELCGKGGVLLLAQAILKL 267


>emb|CAN67843.1| hypothetical protein VITISV_016666 [Vitis vinifera]
          Length = 1134

 Score =  115 bits (288), Expect = 4e-24
 Identities = 61/139 (43%), Positives = 91/139 (65%), Gaps = 1/139 (0%)
 Frame = -1

Query: 414 ISTHATILHSTIMACSLYFLQELVYPSWPGLVFPEWPELVGVLVKYPQGDRFMDAAFAAI 235
           +S+HA +LHS ++ACSLY L         G +  +W +L  VL  +P+ D FM+AAF A+
Sbjct: 247 LSSHAPLLHSALVACSLYLLT--------GFISTQWQDLGHVLTAHPKVDIFMEAAFRAV 298

Query: 234 RVDVQLLQMMLSFPAEAPCCGSSTSDLEMIAHQCQQCEASLQYMQTLCQHKLFQDFLVKH 55
            + ++ LQ+ LS    A C    +   +++   CQQCEASLQ++Q+LCQ K+F++ L+K+
Sbjct: 299 HLSIRSLQIKLS----AQCVDFPSPAEQVVNSLCQQCEASLQFLQSLCQQKMFRERLLKN 354

Query: 54  KE-CGKAGVLFLARCVLKL 1
           KE CGK GVL LA+ +LKL
Sbjct: 355 KELCGKGGVLLLAQAILKL 373


>emb|CAA09792.1| NDX2 homeobox protein [Lotus japonicus]
          Length = 740

 Score =  109 bits (272), Expect = 3e-22
 Identities = 57/136 (41%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
 Frame = -1

Query: 405 HATILHSTIMACSLYFLQELVYPSWPGLVFPEWPELVGVLVKYPQGDRFMDAAFAAIRVD 226
           H  ++ ST++AC+LY L         G + P+W E+V VL+++P+ D F+DAAF ++R+ 
Sbjct: 35  HMDLMSSTLVACNLYLLT--------GFLSPQWQEMVPVLLEHPKVDVFIDAAFGSVRMV 86

Query: 225 VQLLQMMLSFPAEAPCCGSSTSDLEMIAHQCQQCEASLQYMQTLCQHKLFQDFLVKHKE- 49
           V+ L+  L+   +      S +   ++ + CQQCEASLQ++Q+LCQ KLF + L+K+KE 
Sbjct: 87  VRCLENTLAAYYKDISIEPSLTAERVVYYLCQQCEASLQFIQSLCQQKLFMERLLKNKEL 146

Query: 48  CGKAGVLFLARCVLKL 1
           CGK  +LFLA+ +LKL
Sbjct: 147 CGKGSILFLAQSILKL 162


>ref|XP_003597319.1| NDX1 homeobox protein [Medicago truncatula]
           gi|355486367|gb|AES67570.1| NDX1 homeobox protein
           [Medicago truncatula]
          Length = 1089

 Score =  108 bits (269), Expect = 6e-22
 Identities = 57/137 (41%), Positives = 89/137 (64%), Gaps = 1/137 (0%)
 Frame = -1

Query: 408 THATILHSTIMACSLYFLQELVYPSWPGLVFPEWPELVGVLVKYPQGDRFMDAAFAAIRV 229
           +H  +LHST++AC+LY L         G +  +W ++  VL+ +P+ D FMDAAF ++RV
Sbjct: 306 SHEHLLHSTLVACNLYLLT--------GFISTQWRDIAQVLLAHPKVDIFMDAAFGSVRV 357

Query: 228 DVQLLQMMLSFPAEAPCCGSSTSDLEMIAHQCQQCEASLQYMQTLCQHKLFQDFLVKHKE 49
            V+ L+  L    E     S+ +   ++ + CQQCEASLQ +++LCQ KLF++ L+++KE
Sbjct: 358 VVRCLETTLVAYNEDISMESNLTAERVVFYLCQQCEASLQLLRSLCQQKLFKEQLLRNKE 417

Query: 48  -CGKAGVLFLARCVLKL 1
            CGK G+L LA+ +LKL
Sbjct: 418 LCGKGGILLLAQSILKL 434


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