BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039338
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41
emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]   172   3e-41
ref|XP_002517040.1| pentatricopeptide repeat-containing protein,...   166   1e-39
ref|XP_003538978.1| PREDICTED: pentatricopeptide repeat-containi...   152   3e-35
ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28

>ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
           [Vitis vinifera] gi|296089231|emb|CBI39003.3| unnamed
           protein product [Vitis vinifera]
          Length = 601

 Score =  172 bits (435), Expect = 3e-41
 Identities = 76/119 (63%), Positives = 99/119 (83%)
 Frame = +2

Query: 2   YVQCNRCSDALGVFKNMLAENVKPNQSTFTSVLSACGQLGALDQGKWIHEYINDNKFNVD 181
           YVQCNR  +AL VF+ M+ E ++PNQST TS L+AC QLG+LDQG+W+HEY++ +K  ++
Sbjct: 281 YVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLN 340

Query: 182 ATLGTALIDMYTKCGCINEAFIVFEKMSVKDVYVWTAMINGLAMHGDATSSLSLFYQML 358
           + LGTAL+DMY+KCGC++EA +VFEK+  KDVY WTAMINGLAM GDA SSL+LF QM+
Sbjct: 341 SKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMI 399



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
 Frame = +2

Query: 17  RCSDALGVFKNMLAENVKPNQSTFTSVLSACGQLGALDQGKWIHE-YINDNKFNVDATLG 193
           R  +AL  F  M +  V+ ++ T  SVL A   L  +  G+W+H  Y+   +   D  +G
Sbjct: 184 RAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVG 243

Query: 194 TALIDMYTKCGCINEAFIVFEKMSVKDVYVWTAMINGLAMHGDATSSLSLFYQML 358
           +AL+DMY+KCG  ++A  VF +M  +++  W A+I G         +L +F +M+
Sbjct: 244 SALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMI 298


>emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
          Length = 601

 Score =  172 bits (435), Expect = 3e-41
 Identities = 76/119 (63%), Positives = 99/119 (83%)
 Frame = +2

Query: 2   YVQCNRCSDALGVFKNMLAENVKPNQSTFTSVLSACGQLGALDQGKWIHEYINDNKFNVD 181
           YVQCNR  +AL VF+ M+ E ++PNQST TS L+AC QLG+LDQG+W+HEY++ +K  ++
Sbjct: 281 YVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLN 340

Query: 182 ATLGTALIDMYTKCGCINEAFIVFEKMSVKDVYVWTAMINGLAMHGDATSSLSLFYQML 358
           + LGTAL+DMY+KCGC++EA +VFEK+  KDVY WTAMINGLAM GDA SSL+LF QM+
Sbjct: 341 SKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMI 399



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
 Frame = +2

Query: 17  RCSDALGVFKNMLAENVKPNQSTFTSVLSACGQLGALDQGKWIHE-YINDNKFNVDATLG 193
           R  +AL  F  M +  V+ ++ T  SVL A   L  +  G+W+H  Y+   +   D  +G
Sbjct: 184 RAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVG 243

Query: 194 TALIDMYTKCGCINEAFIVFEKMSVKDVYVWTAMINGLAMHGDATSSLSLFYQML 358
           +AL+DMY+KCG  ++A  VF +M  +++  W A+I G         +L +F +M+
Sbjct: 244 SALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMI 298


>ref|XP_002517040.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543675|gb|EEF45203.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 456

 Score =  166 bits (421), Expect = 1e-39
 Identities = 75/119 (63%), Positives = 98/119 (82%)
 Frame = +2

Query: 2   YVQCNRCSDALGVFKNMLAENVKPNQSTFTSVLSACGQLGALDQGKWIHEYINDNKFNVD 181
           YVQCNR  DAL +F++ML  +V+PNQ T +SVL+A  QLGALD+G+W+H+YI+ N   ++
Sbjct: 273 YVQCNRFKDALLLFQDMLLTDVRPNQCTLSSVLTASAQLGALDRGRWVHDYIDRNSLEMN 332

Query: 182 ATLGTALIDMYTKCGCINEAFIVFEKMSVKDVYVWTAMINGLAMHGDATSSLSLFYQML 358
           + LGTALIDMY KCGCI+EA++VF K+ +K+VY WTAMINGLAMHGDA SSL+LF  M+
Sbjct: 333 SILGTALIDMYAKCGCISEAYVVFNKLHIKNVYTWTAMINGLAMHGDALSSLNLFSHMI 391



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
 Frame = +2

Query: 2   YVQCNRCSDALGVFKNMLAENVKPNQSTFTSVLSACGQLGALDQGKWIHE-YINDNKFNV 178
           YV+     D +  FK M +  VK ++ T  SVL A G  G +  G+W+H  Y+   +   
Sbjct: 171 YVRNGFPVDGIKCFKKMRSMGVKIDEITVVSVLCAAGMAGDVWFGRWVHGFYVESGRVKW 230

Query: 179 DATLGTALIDMYTKCGCINEAFIVFEKMSVKDVYVWTAMINGLAMHGDATSSLSLFYQML 358
           D  +G++L+DMY KCG  ++A  +F +M VK++  W+A+I G         +L LF  ML
Sbjct: 231 DVYIGSSLLDMYCKCGYCDDACKLFNEMPVKNIVCWSALIAGYVQCNRFKDALLLFQDML 290


>ref|XP_003538978.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g50270-like [Glycine max]
          Length = 560

 Score =  152 bits (384), Expect = 3e-35
 Identities = 72/119 (60%), Positives = 91/119 (76%)
 Frame = +2

Query: 2   YVQCNRCSDALGVFKNMLAENVKPNQSTFTSVLSACGQLGALDQGKWIHEYINDNKFNVD 181
           YVQ N+  DAL  F +ML++NV PN  T +SVLSAC Q+GALDQG+ +H+YI  NK N++
Sbjct: 285 YVQSNKFQDALRAFWDMLSDNVAPNDFTLSSVLSACAQMGALDQGRLVHQYIECNKINMN 344

Query: 182 ATLGTALIDMYTKCGCINEAFIVFEKMSVKDVYVWTAMINGLAMHGDATSSLSLFYQML 358
            TLGTAL+DMY KCG I+EA  VFE M VK+VY WT +INGLA+HGDA  +L++F  ML
Sbjct: 345 VTLGTALVDMYAKCGSIDEALRVFENMPVKNVYTWTVIINGLAVHGDALGALNIFCCML 403



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
 Frame = +2

Query: 2   YVQCNRCSDALGVFKNMLAENVKPNQSTFTSVLSACGQLGALDQGKWIHE-YINDNKFNV 178
           YV+ +   +AL  F  M   +   +  T  S+L A   +G  D G+W+H  Y+   +  +
Sbjct: 183 YVKNDCPGEALKCFVKMRLRDRSVDAVTVASILRAAALVGDADFGRWVHGFYVEAGRVQL 242

Query: 179 DATLGTALIDMYTKCGCINEAFIVFEKMSVKDVYVWTAMINGLAMHGDATSSLSLFYQML 358
           D  + +AL+DMY KCG   +A  VF ++  +DV  WT ++ G         +L  F+ ML
Sbjct: 243 DGYVFSALMDMYFKCGHCEDACKVFNELPHRDVVCWTVLVAGYVQSNKFQDALRAFWDML 302


>ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|222871507|gb|EEF08638.1|
           predicted protein [Populus trichocarpa]
          Length = 665

 Score =  130 bits (327), Expect = 1e-28
 Identities = 60/118 (50%), Positives = 82/118 (69%)
 Frame = +2

Query: 2   YVQCNRCSDALGVFKNMLAENVKPNQSTFTSVLSACGQLGALDQGKWIHEYINDNKFNVD 181
           Y++     +AL VF  M  E ++P +   +SVL+AC  LGALDQG+WIH Y+N+N  + D
Sbjct: 268 YIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFD 327

Query: 182 ATLGTALIDMYTKCGCINEAFIVFEKMSVKDVYVWTAMINGLAMHGDATSSLSLFYQM 355
           A LGTAL+DMY KCG ++ A+ VFEKM  K+V+ W AMI GL MHG A  ++ LF++M
Sbjct: 328 AVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKM 385