BLASTX nr result

ID: Bupleurum21_contig00039309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039309
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002462720.1| hypothetical protein SORBIDRAFT_02g030860 [S...    89   4e-16
ref|XP_002465815.1| hypothetical protein SORBIDRAFT_01g046340 [S...    87   1e-15
ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...    86   2e-15
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    84   1e-14
ref|XP_002462405.1| hypothetical protein SORBIDRAFT_02g025125 [S...    82   3e-14

>ref|XP_002462720.1| hypothetical protein SORBIDRAFT_02g030860 [Sorghum bicolor]
           gi|241926097|gb|EER99241.1| hypothetical protein
           SORBIDRAFT_02g030860 [Sorghum bicolor]
          Length = 438

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 5/147 (3%)
 Frame = +3

Query: 3   GISINVIKDPWLQDIINPYVSSTNATLENMSVSSLLIAGENR*NVDLIYDLFNERDVNLI 182
           G+S N+    W+ +       +  A L+ ++VS LL A     N ++I   F   D + I
Sbjct: 77  GVSTNIWSHKWISNHFAGQPITPRANLQILNVSDLLTAS-GEWNTEIIKTCFLPIDADAI 135

Query: 183 LSIPLNQSADDVWYWKKERLGQYSVKSAYVLIQEMK-----NVNNAGASLKCWKRLWALK 347
           L  P+ +++ D W W  E+ G YSV+SAY L+   K     N+    +S+  WK LW L+
Sbjct: 136 LRQPIGRNSQDFWAWNSEKTGVYSVRSAYKLLYNKKFGWNQNLAPGSSSVGLWKMLWKLQ 195

Query: 348 IPFKVKHFMWRAVSGCLPTKSQLQQKH 428
           +P KV+ F WR  +  LP +  L +KH
Sbjct: 196 VPPKVRVFWWRVANDFLPARQVLFKKH 222


>ref|XP_002465815.1| hypothetical protein SORBIDRAFT_01g046340 [Sorghum bicolor]
            gi|241919669|gb|EER92813.1| hypothetical protein
            SORBIDRAFT_01g046340 [Sorghum bicolor]
          Length = 1028

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/147 (32%), Positives = 75/147 (51%), Gaps = 5/147 (3%)
 Frame = +3

Query: 3    GISINVIKDPWLQDIINPYVSSTNATLENMSVSSLLIAGENR*NVDLIYDLFNERDVNLI 182
            G+S N+    W+ +       +  A L+ ++VS LL       N ++I   F   D + I
Sbjct: 849  GVSTNIWSHKWISNHFAGQPITPRANLQILNVSDLLTTS-GEWNTEIIKTCFLPIDADAI 907

Query: 183  LSIPLNQSADDVWYWKKERLGQYSVKSAYVLIQEMK-----NVNNAGASLKCWKRLWALK 347
            L  P+ +++ D W W  E+ G YSV+SAY L+   K     N+    +S+  WK LW L+
Sbjct: 908  LRQPIGRNSQDFWAWNSEKTGVYSVRSAYKLLYNKKFGWNQNLAPGSSSVGLWKMLWKLQ 967

Query: 348  IPFKVKHFMWRAVSGCLPTKSQLQQKH 428
            +P KV+ F WR  +  LP +  L +KH
Sbjct: 968  VPPKVRVFWWRVANDFLPARQVLFKKH 994


>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
 Frame = +3

Query: 81  LENMSVSSLLIAGENR*NVDLIYDLFNERDVNLILSIPL-NQSADDVWYWKKERLGQYSV 257
           LE+ +V+ +L   E R + D++ DLFN RD  LI SIPL N++ +D WYW  +  G Y V
Sbjct: 350 LEDATVAGILQINERRWDGDILVDLFNGRDKRLIESIPLTNRNVEDSWYWLFDDKGNYLV 409

Query: 258 KSAYVLIQEMKNVNNAGASLKCWKRLWALKIPFKVKHFMWRAVSGCLPTKSQLQQKH 428
           K+ Y L+Q     +        W + W LKIP KV++ MW+  S C+ T   L+ ++
Sbjct: 410 KNCYRLLQG----DLGRPETSFWNKFWKLKIPTKVRNLMWKICSNCIRTAMNLRMRY 462


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 1/143 (0%)
 Frame = +3

Query: 3    GISINVIKDPWLQDIINPYVSSTNATLENMSVSSLLIAGENR*NVDLIYDLFNERDVNLI 182
            G ++ + +DPW+ D +  +++S      NM VS L+        V LI  +FNERD+  I
Sbjct: 933  GTNVRIWEDPWVLDELGRFITSEKHGNLNM-VSELIDFDRMEWKVSLIETVFNERDIKCI 991

Query: 183  LSIPLNQ-SADDVWYWKKERLGQYSVKSAYVLIQEMKNVNNAGASLKCWKRLWALKIPFK 359
            LSIPL+     D   W   +   YSVK+AY+L +      N  +  + W  +W++++  K
Sbjct: 992  LSIPLSSLPLKDELTWAFTKNAHYSVKTAYMLGKG----GNLDSFHQAWIDIWSMEVSPK 1047

Query: 360  VKHFMWRAVSGCLPTKSQLQQKH 428
            VKHF+WR  +  LP +S L+ +H
Sbjct: 1048 VKHFLWRLGTNTLPVRSLLKHRH 1070


>ref|XP_002462405.1| hypothetical protein SORBIDRAFT_02g025125 [Sorghum bicolor]
           gi|241925782|gb|EER98926.1| hypothetical protein
           SORBIDRAFT_02g025125 [Sorghum bicolor]
          Length = 457

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 50/148 (33%), Positives = 71/148 (47%), Gaps = 6/148 (4%)
 Frame = +3

Query: 3   GISINVIKDPWLQDIINPYVSSTNATLENMSVSSLLIAGENR*NVDLIYDLFNER-DVNL 179
           G+S ++ +D WL    N +        E  SVS              + +L +E  D   
Sbjct: 80  GVSTHIWRDRWLP---NHFGGRPLTPAEGQSVS-------------WVSELLSENVDAEA 123

Query: 180 ILSIPLNQSADDVWYWKKERLGQYSVKSAYVLIQEMKNVNN-----AGASLKCWKRLWAL 344
           IL  P+   +DD+W W+ E+ G YSVKSAY LI + +          G+   CW  +W L
Sbjct: 124 ILRTPIRFQSDDIWAWEPEKHGVYSVKSAYRLIDKGRTNGGHQEAVGGSGNSCWSEIWKL 183

Query: 345 KIPFKVKHFMWRAVSGCLPTKSQLQQKH 428
           K+P KVK F WR +   LPT+  L +KH
Sbjct: 184 KVPPKVKVFWWRVLHEFLPTRLALHRKH 211


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