BLASTX nr result

ID: Bupleurum21_contig00039286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039286
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM09006.1| cytokinin oxidase/dehydrogenase-like [Solanum ly...   166   2e-39
ref|XP_002307681.1| cytokinin oxidase [Populus trichocarpa] gi|2...   161   4e-38
ref|XP_002300742.1| cytokinin oxidase [Populus trichocarpa] gi|2...   161   6e-38
ref|XP_002510450.1| gulonolactone oxidase, putative [Ricinus com...   160   8e-38
gb|ACP40988.1| cytokinin oxidase/dehydrogenase [Solanum tuberosum]    159   2e-37

>dbj|BAM09006.1| cytokinin oxidase/dehydrogenase-like [Solanum lycopersicum]
          Length = 524

 Score =  166 bits (419), Expect = 2e-39
 Identities = 79/115 (68%), Positives = 94/115 (81%), Gaps = 3/115 (2%)
 Frame = -1

Query: 336 HQSEPLAVFHPKSADDISRLIRTAYESADEVTVSARGHGHSINGQAQTKNGVVVQMSGGL 157
           +++EP+AV HP +++D++RL++ AY+SA   TVSARGHGHSINGQA T+NGVVVQMSGGL
Sbjct: 54  YRAEPMAVLHPATSEDVARLVKAAYDSARGFTVSARGHGHSINGQAMTRNGVVVQMSGGL 113

Query: 156 GEPRLVGKE---YVDVWGGELWINVLNYTLRYGLAPKSWTDYLYLSVGGTLSNAG 1
               L   E   Y DVWGGELWI+VL  TL YGLAPKSWTDYLYL+VGGTLSNAG
Sbjct: 114 KNKMLTVSEKFMYADVWGGELWIDVLTSTLEYGLAPKSWTDYLYLTVGGTLSNAG 168


>ref|XP_002307681.1| cytokinin oxidase [Populus trichocarpa] gi|222857130|gb|EEE94677.1|
           cytokinin oxidase [Populus trichocarpa]
          Length = 534

 Score =  161 bits (408), Expect = 4e-38
 Identities = 81/122 (66%), Positives = 96/122 (78%), Gaps = 11/122 (9%)
 Frame = -1

Query: 333 QSEPLAVFHPKSADDISRLIRTAYESADEVTVSARGHGHSINGQAQTKNGVVVQMSGG-- 160
           +SEP+AV HP SADDI+RL++ AY S+   TVSARGHGHSINGQAQT NGVV++M+GG  
Sbjct: 55  RSEPMAVLHPGSADDIARLVQAAYLSSQGFTVSARGHGHSINGQAQTSNGVVIEMNGGSR 114

Query: 159 --------LGEPRLVGKE-YVDVWGGELWINVLNYTLRYGLAPKSWTDYLYLSVGGTLSN 7
                   L +P++  KE +VDVWGGELWI+VL  TL +GLAPKSWTDYLYLSVGGTLSN
Sbjct: 115 GSRLGLGNLAKPQVAVKEMHVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSN 174

Query: 6   AG 1
            G
Sbjct: 175 GG 176


>ref|XP_002300742.1| cytokinin oxidase [Populus trichocarpa] gi|222842468|gb|EEE80015.1|
           cytokinin oxidase [Populus trichocarpa]
          Length = 535

 Score =  161 bits (407), Expect = 6e-38
 Identities = 82/122 (67%), Positives = 96/122 (78%), Gaps = 11/122 (9%)
 Frame = -1

Query: 333 QSEPLAVFHPKSADDISRLIRTAYESADEVTVSARGHGHSINGQAQTKNGVVVQMSGG-- 160
           ++EP+AV HP SADDI+RL+R AY S+   TVSARGHGHSINGQAQT NGVV++MSGG  
Sbjct: 55  RAEPMAVLHPGSADDIARLVRAAYISSHGFTVSARGHGHSINGQAQTSNGVVIEMSGGSR 114

Query: 159 --------LGEPRLVGKE-YVDVWGGELWINVLNYTLRYGLAPKSWTDYLYLSVGGTLSN 7
                   L +P++  KE +VDVWGGELWI+VL  TL +GLAPKSWTDYLYLSVGGTLSN
Sbjct: 115 GSRFGLRKLDKPQVSIKEKHVDVWGGELWIDVLRSTLEHGLAPKSWTDYLYLSVGGTLSN 174

Query: 6   AG 1
            G
Sbjct: 175 GG 176


>ref|XP_002510450.1| gulonolactone oxidase, putative [Ricinus communis]
           gi|223551151|gb|EEF52637.1| gulonolactone oxidase,
           putative [Ricinus communis]
          Length = 540

 Score =  160 bits (406), Expect = 8e-38
 Identities = 85/124 (68%), Positives = 97/124 (78%), Gaps = 13/124 (10%)
 Frame = -1

Query: 333 QSEPLAVFHPKSADDISRLIRTAYESADEVTVSARGHGHSINGQAQTK-NGVVVQMSGG- 160
           +S+P+AVFHP SA DI+RL+R AY SA   TVSARGHGHSINGQAQT+ NGVV++MSG  
Sbjct: 56  RSQPMAVFHPASAQDIARLVRAAYNSAHGFTVSARGHGHSINGQAQTRINGVVIEMSGSD 115

Query: 159 -----LG-----EPRLVGKE-YVDVWGGELWINVLNYTLRYGLAPKSWTDYLYLSVGGTL 13
                LG      P++  KE +VDVWGGELWI+VL  TL YGLAPKSWTDYLYLSVGGTL
Sbjct: 116 SRRSQLGLRKPASPKVSAKEMHVDVWGGELWIDVLKSTLEYGLAPKSWTDYLYLSVGGTL 175

Query: 12  SNAG 1
           SNAG
Sbjct: 176 SNAG 179


>gb|ACP40988.1| cytokinin oxidase/dehydrogenase [Solanum tuberosum]
          Length = 526

 Score =  159 bits (403), Expect = 2e-37
 Identities = 79/117 (67%), Positives = 93/117 (79%), Gaps = 5/117 (4%)
 Frame = -1

Query: 336 HQSEPLAVFHPKSADDISRLIRTAYESADEVTVSARGHGHSINGQAQTKNGVVVQMSGGL 157
           +++EP+AV HP +++D++RL++ AY+SA   TVSARGHGHSINGQA T NGVVVQMSGG 
Sbjct: 54  YKAEPMAVLHPATSEDVARLVKAAYDSARGFTVSARGHGHSINGQAMTTNGVVVQMSGGG 113

Query: 156 GEPR--LVGKE---YVDVWGGELWINVLNYTLRYGLAPKSWTDYLYLSVGGTLSNAG 1
           G     L   E   Y DVWGGELWI+VL  TL YGLAPKSWTDYLYL+VGGTLSNAG
Sbjct: 114 GSKNKMLTISEKFMYADVWGGELWIDVLTSTLEYGLAPKSWTDYLYLTVGGTLSNAG 170


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