BLASTX nr result

ID: Bupleurum21_contig00039283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039283
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512482.1| ATP-binding cassette transporter, putative [...   202   3e-50
ref|XP_002519313.1| ATP-binding cassette transporter, putative [...   198   3e-49
ref|XP_002301544.1| predicted protein [Populus trichocarpa] gi|2...   198   4e-49
sp|Q5W274.1|PDR3_TOBAC RecName: Full=Pleiotropic drug resistance...   197   7e-49
ref|XP_002266393.2| PREDICTED: pleiotropic drug resistance prote...   197   1e-48

>ref|XP_002512482.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223548443|gb|EEF49934.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1458

 Score =  202 bits (513), Expect = 3e-50
 Identities = 93/120 (77%), Positives = 108/120 (90%)
 Frame = -3

Query: 362 KILGLDMCADTPVGDAIRRGISGGQKRRLATGEMIVSPKRVLFMDEISNGLDTSTTFQII 183
           KILGLD+CADT VGDA+RRGISGGQK+RL TGEMIV P + LFMDE+SNGLD+STTFQI+
Sbjct: 314 KILGLDICADTMVGDAMRRGISGGQKKRLTTGEMIVGPAKTLFMDEVSNGLDSSTTFQIV 373

Query: 182 TCLQQLVHITNVTALISLLQPAPESFDLFDDIILYAEGKVVYHGPRVDVLEFFDECGFKC 3
           +CLQ LVHIT+ TALISLLQPAPE+FDLFDD+IL AEGK+VYHGPR  +  FF+ECGF+C
Sbjct: 374 SCLQHLVHITDATALISLLQPAPETFDLFDDVILMAEGKIVYHGPRPSICSFFEECGFRC 433



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 5/115 (4%)
 Frame = -3

Query: 350  LDMCADTPVGDAIRRGISGGQKRRLATGEMIVSPKRVLFMDEISNGLDTSTTFQIITCLQ 171
            LD   D+ VG     G+S  Q++RL     +VS   ++FMDE + GLD      ++  ++
Sbjct: 977  LDGIKDSLVGLPGISGLSTEQRKRLTIAVELVSNPSIIFMDEPTTGLDARAAAIVMRAVK 1036

Query: 170  QLVHITNVTALISLLQPAPESFDLFDDIILY-AEGKVVYHGP----RVDVLEFFD 21
             +V  T  T + ++ QP+ + F+ FD++IL    G+++Y GP       V+E+F+
Sbjct: 1037 NVVE-TGRTVVCTIHQPSIDIFEAFDELILLKIGGRIIYSGPLGRHSSRVIEYFE 1090


>ref|XP_002519313.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223541628|gb|EEF43177.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1393

 Score =  198 bits (504), Expect = 3e-49
 Identities = 91/120 (75%), Positives = 108/120 (90%)
 Frame = -3

Query: 362 KILGLDMCADTPVGDAIRRGISGGQKRRLATGEMIVSPKRVLFMDEISNGLDTSTTFQII 183
           KILGLDMCADT VGDA++RGISGGQK+RL TGEMIV P + LFMDEISNGLD+STTFQI+
Sbjct: 316 KILGLDMCADTMVGDAMKRGISGGQKKRLTTGEMIVGPTKALFMDEISNGLDSSTTFQIV 375

Query: 182 TCLQQLVHITNVTALISLLQPAPESFDLFDDIILYAEGKVVYHGPRVDVLEFFDECGFKC 3
           +CLQ LVHIT+ TAL+SLLQPAPE+FDLFDD+IL AEGK+VY+GPR  +  FF++CGF+C
Sbjct: 376 SCLQHLVHITDATALVSLLQPAPETFDLFDDVILMAEGKIVYNGPRSSICNFFEDCGFRC 435



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
 Frame = -3

Query: 350  LDMCADTPVGDAIRRGISGGQKRRLATGEMIVSPKRVLFMDEISNGLDTSTTFQIITCLQ 171
            LD   D+ VG     G+S  Q++RL     +VS   ++FMDE + GLD      ++   +
Sbjct: 941  LDEIKDSLVGMPGISGLSTEQRKRLTIAVELVSNPSIIFMDEPTTGLDARAAAIVMRAAK 1000

Query: 170  QLVHITNVTALISLLQPAPESFDLFDDIILY-AEGKVVYHGP----RVDVLEFFD 21
             +V  T  T + ++ QP+ + F+ FD++IL    G+++Y GP       V+E+F+
Sbjct: 1001 NVVE-TGRTVVCTIHQPSIDIFEAFDELILLKIGGRIIYSGPLGQRSSRVIEYFE 1054


>ref|XP_002301544.1| predicted protein [Populus trichocarpa] gi|222843270|gb|EEE80817.1|
           predicted protein [Populus trichocarpa]
          Length = 1368

 Score =  198 bits (503), Expect = 4e-49
 Identities = 92/120 (76%), Positives = 107/120 (89%)
 Frame = -3

Query: 362 KILGLDMCADTPVGDAIRRGISGGQKRRLATGEMIVSPKRVLFMDEISNGLDTSTTFQII 183
           KILGLD+CADT VGDA+RRGISGGQK+RL TGEMI+ P + LFMDEISNGLD+STTFQI+
Sbjct: 288 KILGLDICADTMVGDAMRRGISGGQKKRLTTGEMIIGPTKALFMDEISNGLDSSTTFQIV 347

Query: 182 TCLQQLVHITNVTALISLLQPAPESFDLFDDIILYAEGKVVYHGPRVDVLEFFDECGFKC 3
           +C+QQL HIT  T L+SLLQPAPE FDLFDDIIL AEG++VYHGPR +VLEFF+ CGF+C
Sbjct: 348 SCMQQLAHITKSTMLVSLLQPAPEIFDLFDDIILMAEGEIVYHGPRDNVLEFFEHCGFRC 407


>sp|Q5W274.1|PDR3_TOBAC RecName: Full=Pleiotropic drug resistance protein 3; AltName:
           Full=NtPDR3 gi|55056942|emb|CAH39853.1| PDR-like ABC
           transporter [Nicotiana tabacum]
          Length = 1447

 Score =  197 bits (501), Expect = 7e-49
 Identities = 92/120 (76%), Positives = 106/120 (88%)
 Frame = -3

Query: 362 KILGLDMCADTPVGDAIRRGISGGQKRRLATGEMIVSPKRVLFMDEISNGLDTSTTFQII 183
           KILGLD+CADT VGDA+RRGISGGQK+RL TGE+IV P + LFMDEISNGLD+STT+QI+
Sbjct: 324 KILGLDICADTLVGDAMRRGISGGQKKRLTTGELIVGPIKALFMDEISNGLDSSTTYQIV 383

Query: 182 TCLQQLVHITNVTALISLLQPAPESFDLFDDIILYAEGKVVYHGPRVDVLEFFDECGFKC 3
            CLQQL HIT+ T L+SLLQPAPE+FDLFDDIIL AEGK++YHGPR   LEFF+ CGFKC
Sbjct: 384 ACLQQLAHITDATILVSLLQPAPETFDLFDDIILMAEGKILYHGPRNSALEFFESCGFKC 443


>ref|XP_002266393.2| PREDICTED: pleiotropic drug resistance protein 3-like [Vitis
           vinifera]
          Length = 1492

 Score =  197 bits (500), Expect = 1e-48
 Identities = 92/120 (76%), Positives = 104/120 (86%)
 Frame = -3

Query: 362 KILGLDMCADTPVGDAIRRGISGGQKRRLATGEMIVSPKRVLFMDEISNGLDTSTTFQII 183
           KILGLD+CAD  VGDA+RRGISGGQK+RL TGEMIV P   LFMDEIS GLD+STTFQI+
Sbjct: 364 KILGLDICADIMVGDAMRRGISGGQKKRLTTGEMIVGPTNTLFMDEISTGLDSSTTFQIV 423

Query: 182 TCLQQLVHITNVTALISLLQPAPESFDLFDDIILYAEGKVVYHGPRVDVLEFFDECGFKC 3
           TCLQQL HIT  T L++LLQPAPE+FDLFDD+IL AEGK+VYHGPR  VL+FF+ CGFKC
Sbjct: 424 TCLQQLAHITEATVLVTLLQPAPETFDLFDDLILMAEGKIVYHGPRSHVLQFFEHCGFKC 483


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