BLASTX nr result

ID: Bupleurum21_contig00039260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039260
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr...   134   6e-30
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    91   7e-17
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    82   3e-14
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...    81   8e-14
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...    67   1e-09

>gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
          Length = 814

 Score =  134 bits (338), Expect = 6e-30
 Identities = 60/117 (51%), Positives = 83/117 (70%)
 Frame = -2

Query: 353 FNTIEMRKQLWKFIGEVVERVKGPMVFSGDFNSVLLLEDRFQGNVITENEIRDFDECLKG 174
           FNT+E RK+LW FI     +    ++  GDFN+VLL++DR  GN +T++EI+DF +CL  
Sbjct: 628 FNTLEQRKELWNFIAHTSAQNSRNLLIGGDFNNVLLVDDRRNGNPVTQHEIQDFSDCLLH 687

Query: 173 NELNVVRSIGSYYTWCNKQDNEDMILSRIDRCVANTDWMEMYSDVVVEVLEKNVSDH 3
           N L+ VR+IG YYTWCN Q + D I S+IDR +ANT W++ +++ V EVL K VSDH
Sbjct: 688 NRLSEVRTIGDYYTWCNNQTSGDRIYSKIDRFIANTSWLQKFTNAVGEVLPKGVSDH 744


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 46/116 (39%), Positives = 67/116 (57%)
 Frame = -2

Query: 350 NTIEMRKQLWKFIGEVVERVKGPMVFSGDFNSVLLLEDRFQGNVITENEIRDFDECLKGN 171
           +TI  RK LW  + + V++ + PM+  GDFN+V    DR  G ++T+ E  DF + L  +
Sbjct: 110 HTIADRKSLWSGLLQCVQQ-QDPMIIIGDFNAVCHSNDRLYGTLVTDAETEDFQQFLLQS 168

Query: 170 ELNVVRSIGSYYTWCNKQDNEDMILSRIDRCVANTDWMEMYSDVVVEVLEKNVSDH 3
            L   RS  SYY+W N     D +LSRID+   N  W+ MY++V V+ L   +SDH
Sbjct: 169 NLIESRSTWSYYSWSNSSIGRDRVLSRIDKAYVNLVWLGMYAEVSVQYLPPGISDH 224


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 43/116 (37%), Positives = 60/116 (51%)
 Frame = -2

Query: 350 NTIEMRKQLWKFIGEVVERVKGPMVFSGDFNSVLLLEDRFQGNVITENEIRDFDECLKGN 171
           +TI  RK LW+ +   V     P +  GD+N+V   +DR  GN ++E E  D    +   
Sbjct: 112 HTIADRKVLWEELYNFVSVCHEPCILIGDYNAVYSAQDRLNGNDVSEAETSDLRSFVLKA 171

Query: 170 ELNVVRSIGSYYTWCNKQDNEDMILSRIDRCVANTDWMEMYSDVVVEVLEKNVSDH 3
           +L    + G +Y+W NK    D I SRID+   N  W+  Y DVVVE  E  +SDH
Sbjct: 172 QLLEAPTTGLFYSWNNKSIGADRISSRIDKSFVNVAWINQYPDVVVEYREAGISDH 227


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 44/116 (37%), Positives = 64/116 (55%)
 Frame = -2

Query: 350 NTIEMRKQLWKFIGEVVERVKGPMVFSGDFNSVLLLEDRFQGNVITENEIRDFDECLKGN 171
           N ++ RK LWK +  + +  +GP    GDFN+V   +DR  G  +TE+E  D    ++  
Sbjct: 452 NQLDRRKVLWKDLEAIHKHQQGPWCVIGDFNNVTKAQDRIGGKAVTESEYIDLLNMMETT 511

Query: 170 ELNVVRSIGSYYTWCNKQDNEDMILSRIDRCVANTDWMEMYSDVVVEVLEKNVSDH 3
            L  + + G +YTW NKQ     I SRIDR + N +W +   D V+ VL  +VSDH
Sbjct: 512 CLAEMDTTGEFYTWTNKQ-VIGTIYSRIDRVLGNLNWFQDNLDTVLTVLPTSVSDH 566


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
           Japonica Group]
          Length = 1382

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/113 (31%), Positives = 57/113 (50%)
 Frame = -2

Query: 341 EMRKQLWKFIGEVVERVKGPMVFSGDFNSVLLLEDRFQGNVITENEIRDFDECLKGNELN 162
           E+R   W  +  + ++ +GP +  GDFN VL L++       +E  ++ F  CL    L 
Sbjct: 117 ELRHFFWNLLRRLHDQWRGPWLCCGDFNEVLCLDEHLGMRERSEPHMQHFRSCLDDCGLI 176

Query: 161 VVRSIGSYYTWCNKQDNEDMILSRIDRCVANTDWMEMYSDVVVEVLEKNVSDH 3
            +  +G  +TW NKQD       R+DR VAN ++   + D +VE +    SDH
Sbjct: 177 DLGFVGPKFTWSNKQDANSNSKVRLDRAVANGEFSRYFEDCLVENVITTSSDH 229


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