BLASTX nr result

ID: Bupleurum21_contig00039248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039248
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533950.1| PREDICTED: putative clathrin assembly protei...    57   1e-06
ref|XP_002284692.1| PREDICTED: putative clathrin assembly protei...    57   1e-06
ref|XP_002284689.2| PREDICTED: putative clathrin assembly protei...    57   1e-06
ref|XP_004142277.1| PREDICTED: putative clathrin assembly protei...    56   3e-06
ref|XP_002527787.1| clathrin assembly protein, putative [Ricinus...    56   3e-06

>ref|XP_003533950.1| PREDICTED: putative clathrin assembly protein At2g01600-like
          [Glycine max]
          Length = 554

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = -3

Query: 88 MATLQSWRKAYGALKDQTKVSLAHVNSDF 2
          MATLQSWRKAYGA+KD TKV LAHVNSDF
Sbjct: 1  MATLQSWRKAYGAIKDTTKVGLAHVNSDF 29


>ref|XP_002284692.1| PREDICTED: putative clathrin assembly protein At2g01600-like
          isoform 2 [Vitis vinifera]
          Length = 553

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = -3

Query: 88 MATLQSWRKAYGALKDQTKVSLAHVNSDF 2
          MATLQ+WRKAYGALKD TKV LAHVNSDF
Sbjct: 1  MATLQTWRKAYGALKDSTKVGLAHVNSDF 29


>ref|XP_002284689.2| PREDICTED: putative clathrin assembly protein At2g01600-like
          isoform 1 [Vitis vinifera] gi|297737667|emb|CBI26868.3|
          unnamed protein product [Vitis vinifera]
          Length = 567

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = -3

Query: 88 MATLQSWRKAYGALKDQTKVSLAHVNSDF 2
          MATLQ+WRKAYGALKD TKV LAHVNSDF
Sbjct: 1  MATLQTWRKAYGALKDSTKVGLAHVNSDF 29


>ref|XP_004142277.1| PREDICTED: putative clathrin assembly protein At2g01600-like
          [Cucumis sativus] gi|449481254|ref|XP_004156128.1|
          PREDICTED: putative clathrin assembly protein
          At2g01600-like [Cucumis sativus]
          Length = 566

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = -3

Query: 88 MATLQSWRKAYGALKDQTKVSLAHVNSDF 2
          MATLQ+WRKAYGALKD TKV LAHVNSD+
Sbjct: 1  MATLQTWRKAYGALKDSTKVGLAHVNSDY 29


>ref|XP_002527787.1| clathrin assembly protein, putative [Ricinus communis]
          gi|223532822|gb|EEF34597.1| clathrin assembly protein,
          putative [Ricinus communis]
          Length = 567

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = -3

Query: 88 MATLQSWRKAYGALKDQTKVSLAHVNSDF 2
          M TLQ+WRKAYGALKD TKV LAHVNSDF
Sbjct: 1  MGTLQTWRKAYGALKDSTKVGLAHVNSDF 29


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