BLASTX nr result

ID: Bupleurum21_contig00039247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039247
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530015.1| pattern formation protein, putative [Ricinus...    69   3e-10
gb|ABP57378.1| GNOM-like 1 protein [Nicotiana tabacum]                 69   4e-10
ref|NP_198766.1| protein GNOM-like 1 [Arabidopsis thaliana] gi|7...    66   3e-09
ref|XP_002870776.1| hypothetical protein ARALYDRAFT_494037 [Arab...    66   3e-09

>ref|XP_002530015.1| pattern formation protein, putative [Ricinus communis]
           gi|223530494|gb|EEF32377.1| pattern formation protein,
           putative [Ricinus communis]
          Length = 1450

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/54 (68%), Positives = 39/54 (72%)
 Frame = +2

Query: 152 MGCLSEQSEINLFAREFHGCSSRPSGGAFALTVNSEIGAVLAVMRRNVRWGVNY 313
           MG L+ QSEIN F REF  C    + GA A  VNSEIGAVLAVMRRNVRWGV Y
Sbjct: 1   MGHLNLQSEINSFQREFCDCPVISTKGAVACMVNSEIGAVLAVMRRNVRWGVRY 54


>gb|ABP57378.1| GNOM-like 1 protein [Nicotiana tabacum]
          Length = 1442

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/55 (61%), Positives = 40/55 (72%)
 Frame = +2

Query: 149 IMGCLSEQSEINLFAREFHGCSSRPSGGAFALTVNSEIGAVLAVMRRNVRWGVNY 313
           +MGCL++QSE+N    E  G + +PS GA    VNSEIGAVLAVMRRNVRWG  Y
Sbjct: 1   MMGCLNQQSEVNTPISEPKGYTLKPSRGALECMVNSEIGAVLAVMRRNVRWGFRY 55


>ref|NP_198766.1| protein GNOM-like 1 [Arabidopsis thaliana]
           gi|75171562|sp|Q9FLY5.1|GNL1_ARATH RecName: Full=ARF
           guanine-nucleotide exchange factor GNL1; AltName:
           Full=Protein ENDOPLASMIC RETICULUM MORPHOLOGY 1;
           AltName: Full=Protein GNOM-like 1
           gi|10177699|dbj|BAB11025.1| pattern formation protein
           [Arabidopsis thaliana] gi|332007058|gb|AED94441.1|
           protein GNOM-like 1 [Arabidopsis thaliana]
          Length = 1443

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/54 (62%), Positives = 37/54 (68%)
 Frame = +2

Query: 152 MGCLSEQSEINLFAREFHGCSSRPSGGAFALTVNSEIGAVLAVMRRNVRWGVNY 313
           MG  +  S  N F  EF  C S+PS GA A  +NSEIGAVLAVMRRNVRWGV Y
Sbjct: 1   MGYQNHPSGSNSFHGEFKRCHSKPSKGAVASMINSEIGAVLAVMRRNVRWGVRY 54


>ref|XP_002870776.1| hypothetical protein ARALYDRAFT_494037 [Arabidopsis lyrata subsp.
           lyrata] gi|297316612|gb|EFH47035.1| hypothetical protein
           ARALYDRAFT_494037 [Arabidopsis lyrata subsp. lyrata]
          Length = 1445

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/54 (62%), Positives = 37/54 (68%)
 Frame = +2

Query: 152 MGCLSEQSEINLFAREFHGCSSRPSGGAFALTVNSEIGAVLAVMRRNVRWGVNY 313
           MG  +  S  N F  EF  C S+PS GA A  +NSEIGAVLAVMRRNVRWGV Y
Sbjct: 1   MGYQNHPSGSNSFHGEFKRCHSKPSKGAVASMINSEIGAVLAVMRRNVRWGVRY 54


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