BLASTX nr result

ID: Bupleurum21_contig00039246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039246
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA20460.1| putative protein [Arabidopsis thaliana] gi|72691...    69   4e-10
ref|NP_194070.2| uncharacterized protein [Arabidopsis thaliana] ...    69   4e-10
ref|XP_002867710.1| hypothetical protein ARALYDRAFT_492537 [Arab...    67   2e-09
ref|NP_179526.2| uncharacterized protein [Arabidopsis thaliana] ...    64   2e-08
emb|CBI40372.3| unnamed protein product [Vitis vinifera]               59   6e-07

>emb|CAA20460.1| putative protein [Arabidopsis thaliana] gi|7269187|emb|CAB79294.1|
           putative protein [Arabidopsis thaliana]
          Length = 363

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
 Frame = +1

Query: 4   NNEEVGYWPRELFST--LQDGADQALWGGEVYNHNSDEFPAMGSGTSDLKTLEESNNNGY 177
           NNE +GYWP+ LF+   L DGA    WGGEVY+   ++ P+MGSG    +  +++    Y
Sbjct: 249 NNEPIGYWPKSLFTRQGLADGASAVFWGGEVYSSVKEKSPSMGSGHFPQEGFKKA---AY 305

Query: 178 LRKIQVTTYYTNE-DEPVS---VTAGSTSGCYYANDADYRGDYWGISFVFGGSAAAI 336
           +  +++ T  T E   P++    T  S+  CY        G++W  + +FGG    I
Sbjct: 306 VNGLKIITDITKEVSSPLASALKTFASSPNCYNVQKILGVGEFWSRAILFGGPGGCI 362


>ref|NP_194070.2| uncharacterized protein [Arabidopsis thaliana]
           gi|26451085|dbj|BAC42647.1| unknown protein [Arabidopsis
           thaliana] gi|28950971|gb|AAO63409.1| At4g23390
           [Arabidopsis thaliana] gi|332659347|gb|AEE84747.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 401

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
 Frame = +1

Query: 4   NNEEVGYWPRELFST--LQDGADQALWGGEVYNHNSDEFPAMGSGTSDLKTLEESNNNGY 177
           NNE +GYWP+ LF+   L DGA    WGGEVY+   ++ P+MGSG    +  +++    Y
Sbjct: 287 NNEPIGYWPKSLFTRQGLADGASAVFWGGEVYSSVKEKSPSMGSGHFPQEGFKKA---AY 343

Query: 178 LRKIQVTTYYTNE-DEPVS---VTAGSTSGCYYANDADYRGDYWGISFVFGGSAAAI 336
           +  +++ T  T E   P++    T  S+  CY        G++W  + +FGG    I
Sbjct: 344 VNGLKIITDITKEVSSPLASALKTFASSPNCYNVQKILGVGEFWSRAILFGGPGGCI 400


>ref|XP_002867710.1| hypothetical protein ARALYDRAFT_492537 [Arabidopsis lyrata subsp.
           lyrata] gi|297313546|gb|EFH43969.1| hypothetical protein
           ARALYDRAFT_492537 [Arabidopsis lyrata subsp. lyrata]
          Length = 400

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
 Frame = +1

Query: 4   NNEEVGYWPRELFST--LQDGADQALWGGEVYNHNSDEFPAMGSGTSDLKTLEESNNNGY 177
           NNE +GYWP+ LF    L DGA    WGGEVY+   ++ P+MGSG    +  +++    Y
Sbjct: 286 NNEPIGYWPKSLFKPQGLADGASAVFWGGEVYSSVKEKSPSMGSGHFPQEGYKKA---AY 342

Query: 178 LRKIQVTTYYTNE-DEPVS---VTAGSTSGCYYANDADYRGDYWGISFVFGG 321
           +   ++ T  T E   P++    T   +  CY        G+YW  + +FGG
Sbjct: 343 VNGFKIITDITKEVSSPLASALKTVADSPNCYNVKKILGVGEYWSRAILFGG 394


>ref|NP_179526.2| uncharacterized protein [Arabidopsis thaliana]
           gi|330251779|gb|AEC06873.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 426

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/106 (36%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
 Frame = +1

Query: 16  VGYWPRELFSTLQDGADQALWGGEVYN---HNSDEFPAMGSGTSDLKTLEESNNNGYLRK 186
           VGYWP  LF+ L D A Q  WGGE+ N   +N      MGSG+  +    +++   Y R 
Sbjct: 318 VGYWPSSLFNRLGDAASQVHWGGEIVNVKENNQHTSTQMGSGSFAINGFRKAS---YFRN 374

Query: 187 IQVTTYYTNEDEPVSVTAGSTSGCYYANDADYRGDY-WGISFVFGG 321
           I V        +PV  +   T G  Y  D  YR D  WG  F +GG
Sbjct: 375 ILVLDENNTTKQPVGASTSETEGSCY--DIRYRTDQAWGSFFYYGG 418


>emb|CBI40372.3| unnamed protein product [Vitis vinifera]
          Length = 389

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
 Frame = +1

Query: 13  EVGYWPRELFSTLQDGADQALWGGEVYNHNSDEFPAMGSGTSDLKTLEESNNNGYLRKIQ 192
           E GYWP++LFS     A +  WGGEV++  S  FP MGSG       E +    ++R ++
Sbjct: 283 EFGYWPKQLFSFF-GAARELYWGGEVFSP-SQPFPPMGSGHFPE---EGAGAACFMRALK 337

Query: 193 VT-----TYYTNEDEPVSVTAGSTSGCYYANDADYRGDYWGISFVFGG 321
                   +    D+ +SV A S  GCY       RG +WGI+F+FGG
Sbjct: 338 YQYEDGGAFEDILDKGMSVLADSP-GCYKVGPLINRGGFWGITFLFGG 384


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