BLASTX nr result

ID: Bupleurum21_contig00039228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039228
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]   156   2e-36
ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]   152   2e-35
ref|XP_002438099.1| hypothetical protein SORBIDRAFT_10g007985 [S...   123   1e-26
ref|XP_002489257.1| hypothetical protein SORBIDRAFT_0011s003210 ...   120   2e-25

>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score =  156 bits (394), Expect = 2e-36
 Identities = 71/147 (48%), Positives = 96/147 (65%)
 Frame = -2

Query: 473 RNHIDALISVPGKEEWRLTGFYGEPNRRLRRNTWELLRVLNQQSSLPWCVIGDMNNILSH 294
           ++HID  +S     +WR+TGFYG P+R  R  +W LLR L   SSLPWC +GD N+I+ +
Sbjct: 391 QSHIDMEVSEEDGLQWRVTGFYGFPDRSQRHLSWNLLRSLYSASSLPWCCLGDFNDIVCN 450

Query: 293 EDKRGGRRYPQWLLQGFCEVVMECGLNDLDLIGHTFTWEKSRGTREWVELRLDRAMATNR 114
           E+KRG   +P WL++GFC  + +C L DL L G+ FTWE+ RG+  WVE  LDRA+    
Sbjct: 451 EEKRGSVPHPPWLIRGFCAALSDCQLQDLXLKGYPFTWERGRGSSHWVEEXLDRALVNVS 510

Query: 113 WLEIHSEARLYNIEISTSDHSPILLET 33
           WL +  +A+L N+    SDHSPI L T
Sbjct: 511 WLNLFXBAKLNNLVAPVSDHSPIELNT 537


>ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|222842328|gb|EEE79875.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  153 bits (386), Expect = 2e-35
 Identities = 69/146 (47%), Positives = 96/146 (65%)
 Frame = -2

Query: 470 NHIDALISVPGKEEWRLTGFYGEPNRRLRRNTWELLRVLNQQSSLPWCVIGDMNNILSHE 291
           NHID L+       WR TG+YG P+R  +  +W LLR L++QS+LPW  +GD N++L  E
Sbjct: 71  NHIDLLVVEANNFIWRFTGYYGLPDRNRKMESWNLLRALSRQSALPWVCMGDYNDMLCAE 130

Query: 290 DKRGGRRYPQWLLQGFCEVVMECGLNDLDLIGHTFTWEKSRGTREWVELRLDRAMATNRW 111
           +KRG   +P    QGF E V +C L D+ LIG+ FTWE+ RGT EW++ R+DRAM ++ W
Sbjct: 131 EKRGRVLHPNSSFQGFREAVEDCKLTDMPLIGYPFTWERGRGTAEWIQERIDRAMCSDSW 190

Query: 110 LEIHSEARLYNIEISTSDHSPILLET 33
            +    A L+ +  S+SDHSP+LL T
Sbjct: 191 FDYFDRAELHILTCSSSDHSPLLLRT 216


>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score =  152 bits (385), Expect = 2e-35
 Identities = 68/149 (45%), Positives = 101/149 (67%)
 Frame = -2

Query: 467 HIDALISVPGKEEWRLTGFYGEPNRRLRRNTWELLRVLNQQSSLPWCVIGDMNNILSHED 288
           +IDA++++  +  +RLTGFYG  NR  R ++WE+LR L+   SLPWCVIGD N ++   +
Sbjct: 428 YIDAIVTLENQRMFRLTGFYGLANRSQRSSSWEILRNLHAAHSLPWCVIGDFNELMHQSE 487

Query: 287 KRGGRRYPQWLLQGFCEVVMECGLNDLDLIGHTFTWEKSRGTREWVELRLDRAMATNRWL 108
           K G   +P  L++ F +VV  CGL+DL  +G+ +TWE+ RGT  WVE RLDRA+ +  W 
Sbjct: 488 KCGNHPHPGSLIEAFRQVVTNCGLSDLGYVGYAYTWERGRGTTRWVEERLDRALVSADWK 547

Query: 107 EIHSEARLYNIEISTSDHSPILLETDRSV 21
            +  ++RL ++ +STSDH P+LLE  + V
Sbjct: 548 HLFHQSRLIHLFVSTSDHLPVLLELRKFV 576


>ref|XP_002438099.1| hypothetical protein SORBIDRAFT_10g007985 [Sorghum bicolor]
           gi|241916322|gb|EER89466.1| hypothetical protein
           SORBIDRAFT_10g007985 [Sorghum bicolor]
          Length = 649

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/150 (40%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
 Frame = -2

Query: 467 HIDALISVPGKEE--WRLTGFYGEPNRRLRRNTWELLRVLNQQSSLPWCVIGDMNNILSH 294
           HID  I  PG +   WR TGFYGEP R LR  +W+ L+ LN QS LPW   GD N +L  
Sbjct: 351 HIDVAILDPGTQAPMWRFTGFYGEPRRELRGRSWDCLKFLNTQSELPWLCTGDFNEVLEA 410

Query: 293 EDKRGGRRYPQWLLQGFCEVVMECGLNDLDLIGHTFTWEKSRGTREWVELRLDRAMATNR 114
            ++ GG+   +  + GF E V  CGL DL  IG  +TW+  +     V++RLDR +A   
Sbjct: 411 HEQFGGQSRSERQMDGFREAVQVCGLMDLGFIGLPYTWDNRQEGINNVKVRLDRGLANPA 470

Query: 113 WLEIHSEARLYNIEISTSDHSPILLETDRS 24
           +L++  + ++++++ + SDH  +LLE  R+
Sbjct: 471 FLDLFRDTKVWHVQTTESDHCCLLLECFRA 500


>ref|XP_002489257.1| hypothetical protein SORBIDRAFT_0011s003210 [Sorghum bicolor]
           gi|241947006|gb|EES20151.1| hypothetical protein
           SORBIDRAFT_0011s003210 [Sorghum bicolor]
          Length = 821

 Score =  120 bits (300), Expect = 2e-25
 Identities = 57/148 (38%), Positives = 89/148 (60%), Gaps = 2/148 (1%)
 Frame = -2

Query: 473 RNHIDALISVPGKE--EWRLTGFYGEPNRRLRRNTWELLRVLNQQSSLPWCVIGDMNNIL 300
           R+HID ++S    +   WRLTGFYGEP    RR +W LLR L  QSS PW  +GD N +L
Sbjct: 160 RSHIDVILSCDHLKISHWRLTGFYGEPRWERRRESWYLLRFLRAQSSDPWLCLGDFNEVL 219

Query: 299 SHEDKRGGRRYPQWLLQGFCEVVMECGLNDLDLIGHTFTWEKSRGTREWVELRLDRAMAT 120
           + E++ G      W +  F +VV +C L DL   G  +TW+  +     V++RLDRA+  
Sbjct: 220 AMEEQMGANEREMWQVTAFQDVVNDCALTDLGFHGLPYTWDNRQEGGRNVKVRLDRALGD 279

Query: 119 NRWLEIHSEARLYNIEISTSDHSPILLE 36
           N+++E+   + ++++  + SDH+ +L+E
Sbjct: 280 NKFMELLGGSEVFHLPTTESDHAGLLVE 307


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