BLASTX nr result
ID: Bupleurum21_contig00039214
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00039214
(712 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O04937.1|DHEA_NICPL RecName: Full=Glutamate dehydrogenase A; ... 389 e-107
ref|XP_002321781.1| predicted protein [Populus trichocarpa] gi|2... 388 e-107
ref|XP_002339508.1| predicted protein [Populus trichocarpa] gi|2... 388 e-107
ref|NP_196361.1| glutamate dehydrogenase 2 [Arabidopsis thaliana... 386 e-107
dbj|BAH56738.1| AT5G07440 [Arabidopsis thaliana] 386 e-107
>sp|O04937.1|DHEA_NICPL RecName: Full=Glutamate dehydrogenase A; Short=GDH A
gi|2196878|emb|CAA69600.1| NADH glutamate dehydrogenase
[Nicotiana plumbaginifolia] gi|8648954|emb|CAB94836.1|
NADH glutamate dehydrogenase [Nicotiana plumbaginifolia]
Length = 411
Score = 389 bits (1000), Expect(2) = e-107
Identities = 181/221 (81%), Positives = 205/221 (92%)
Frame = +2
Query: 50 MPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPLDLGGSLGRDAATGCGVVYATEALL 229
+PAPDMGTNAQTMAWILDEYSKFHGHSPA+VTGKP+DLGGSLGR+AATG GVVYATEALL
Sbjct: 138 VPAPDMGTNAQTMAWILDEYSKFHGHSPAIVTGKPIDLGGSLGREAATGRGVVYATEALL 197
Query: 230 AEHGKSVQGLKFAIQGFGNVGSWAGKLIHEIGGKVVAVSGVTGAIKNPNGIDIPALLKHR 409
AE+GK+++ L FAIQGFGNVG+WA KLIHE GGKV+AVS +TGA+KNPNG+DIPALL H+
Sbjct: 198 AEYGKNIKDLTFAIQGFGNVGAWAAKLIHERGGKVIAVSDITGAVKNPNGLDIPALLNHK 257
Query: 410 EDAGSLISFNGADVMNADELLGHYCDVLIPCALGGVLNRENANDVRAKFVIEAANHPTDP 589
E G LI F+G DVMN+DE+L H CDVLIPCALGGVLNRENA++V+AKF+IEAANHPTDP
Sbjct: 258 EATGKLIDFSGGDVMNSDEVLTHECDVLIPCALGGVLNRENADNVKAKFIIEAANHPTDP 317
Query: 590 EADEILSKKGVIVLPDIYANAGGVTVIYFEWVQNIQGFMWD 712
EADEIL KKG+++LPDIYANAGGVTV YFEWVQNIQGFMWD
Sbjct: 318 EADEILCKKGIVILPDIYANAGGVTVSYFEWVQNIQGFMWD 358
Score = 27.3 bits (59), Expect(2) = e-107
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +1
Query: 7 VFTQKIHDLIGDQID 51
VFTQKIHDLIG D
Sbjct: 123 VFTQKIHDLIGINTD 137
>ref|XP_002321781.1| predicted protein [Populus trichocarpa] gi|222868777|gb|EEF05908.1|
predicted protein [Populus trichocarpa]
Length = 411
Score = 388 bits (997), Expect(2) = e-107
Identities = 182/221 (82%), Positives = 205/221 (92%)
Frame = +2
Query: 50 MPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPLDLGGSLGRDAATGCGVVYATEALL 229
+PAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKP+DLGGSLGR+AATG GVV+ATEALL
Sbjct: 138 VPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVFATEALL 197
Query: 230 AEHGKSVQGLKFAIQGFGNVGSWAGKLIHEIGGKVVAVSGVTGAIKNPNGIDIPALLKHR 409
AEHGKS++GL FA+QGFGNVGSWA K+IHE GGKV+AVS ++GA+KNPNGIDIP L++H+
Sbjct: 198 AEHGKSIKGLTFAVQGFGNVGSWAAKIIHERGGKVIAVSDISGAVKNPNGIDIPELIRHK 257
Query: 410 EDAGSLISFNGADVMNADELLGHYCDVLIPCALGGVLNRENANDVRAKFVIEAANHPTDP 589
E GSL +F G D M+A+ELL H CDVLIPCALGGVLNRENA DV+AKF+IEAANHPTDP
Sbjct: 258 ESTGSLKNFQGGDSMDANELLVHECDVLIPCALGGVLNRENAADVKAKFIIEAANHPTDP 317
Query: 590 EADEILSKKGVIVLPDIYANAGGVTVIYFEWVQNIQGFMWD 712
EADEIL+KKGV+VLPDIYAN+GGVTV YFEWVQNIQGFMWD
Sbjct: 318 EADEILAKKGVVVLPDIYANSGGVTVSYFEWVQNIQGFMWD 358
Score = 27.3 bits (59), Expect(2) = e-107
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +1
Query: 7 VFTQKIHDLIGDQID 51
VFTQKIHDLIG D
Sbjct: 123 VFTQKIHDLIGVHTD 137
>ref|XP_002339508.1| predicted protein [Populus trichocarpa] gi|222832584|gb|EEE71061.1|
predicted protein [Populus trichocarpa]
Length = 411
Score = 388 bits (996), Expect(2) = e-107
Identities = 185/221 (83%), Positives = 204/221 (92%)
Frame = +2
Query: 50 MPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPLDLGGSLGRDAATGCGVVYATEALL 229
+PAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKP+DLGGSLGR+AATG GVV+ATEALL
Sbjct: 138 VPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVFATEALL 197
Query: 230 AEHGKSVQGLKFAIQGFGNVGSWAGKLIHEIGGKVVAVSGVTGAIKNPNGIDIPALLKHR 409
AEHGKS++ L FAIQGFGNVGSWA KLIHE GGKV+AVS +TGA+KNPNGIDIP LL+H+
Sbjct: 198 AEHGKSIKDLTFAIQGFGNVGSWAAKLIHERGGKVIAVSDITGAVKNPNGIDIPELLRHK 257
Query: 410 EDAGSLISFNGADVMNADELLGHYCDVLIPCALGGVLNRENANDVRAKFVIEAANHPTDP 589
E GSL F GA+ M+A+ELL H CDVLIPCALGGVLNRENA DV+AKF+IEAANHPTDP
Sbjct: 258 ETTGSLKDFQGAESMDANELLIHKCDVLIPCALGGVLNRENAADVKAKFIIEAANHPTDP 317
Query: 590 EADEILSKKGVIVLPDIYANAGGVTVIYFEWVQNIQGFMWD 712
EADEIL+KKGV+VLPDIYAN+GGVTV YFEWVQNIQGFMWD
Sbjct: 318 EADEILAKKGVVVLPDIYANSGGVTVSYFEWVQNIQGFMWD 358
Score = 27.3 bits (59), Expect(2) = e-107
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +1
Query: 7 VFTQKIHDLIGDQID 51
VFTQKIHDLIG D
Sbjct: 123 VFTQKIHDLIGVHTD 137
>ref|NP_196361.1| glutamate dehydrogenase 2 [Arabidopsis thaliana]
gi|186521018|ref|NP_001119183.1| glutamate dehydrogenase
2 [Arabidopsis thaliana]
gi|297806777|ref|XP_002871272.1| hypothetical protein
ARALYDRAFT_487575 [Arabidopsis lyrata subsp. lyrata]
gi|12229806|sp|Q38946.1|DHE2_ARATH RecName:
Full=Glutamate dehydrogenase 2; Short=GDH 2
gi|1336084|gb|AAB01222.1| glutamate dehydrogenase 2
[Arabidopsis thaliana] gi|7576182|emb|CAB87933.1|
glutamate dehydrogenase 2 [Arabidopsis thaliana]
gi|297317109|gb|EFH47531.1| hypothetical protein
ARALYDRAFT_487575 [Arabidopsis lyrata subsp. lyrata]
gi|332003774|gb|AED91157.1| glutamate dehydrogenase 2
[Arabidopsis thaliana] gi|332003775|gb|AED91158.1|
glutamate dehydrogenase 2 [Arabidopsis thaliana]
Length = 411
Score = 386 bits (992), Expect(2) = e-107
Identities = 183/221 (82%), Positives = 203/221 (91%)
Frame = +2
Query: 50 MPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPLDLGGSLGRDAATGCGVVYATEALL 229
+PAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKP+DLGGSLGR+AATG GVV+ATEALL
Sbjct: 138 VPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVFATEALL 197
Query: 230 AEHGKSVQGLKFAIQGFGNVGSWAGKLIHEIGGKVVAVSGVTGAIKNPNGIDIPALLKHR 409
AE+GKS+QGL F IQGFGNVG+WA KLIHE GGKVVAVS +TGAI+NP GIDI AL+KH+
Sbjct: 198 AEYGKSIQGLTFVIQGFGNVGTWAAKLIHEKGGKVVAVSDITGAIRNPEGIDINALIKHK 257
Query: 410 EDAGSLISFNGADVMNADELLGHYCDVLIPCALGGVLNRENANDVRAKFVIEAANHPTDP 589
+ GSL FNG D MN+DELL H CDVLIPCALGGVLN+ENA DV+AKF++EAANHPTDP
Sbjct: 258 DATGSLNDFNGGDAMNSDELLIHECDVLIPCALGGVLNKENAGDVKAKFIVEAANHPTDP 317
Query: 590 EADEILSKKGVIVLPDIYANAGGVTVIYFEWVQNIQGFMWD 712
+ADEILSKKGVI+LPDIYANAGGVTV YFEWVQNIQGFMW+
Sbjct: 318 DADEILSKKGVIILPDIYANAGGVTVSYFEWVQNIQGFMWE 358
Score = 27.3 bits (59), Expect(2) = e-107
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +1
Query: 7 VFTQKIHDLIGDQID 51
VFTQKIHDLIG D
Sbjct: 123 VFTQKIHDLIGIHTD 137
>dbj|BAH56738.1| AT5G07440 [Arabidopsis thaliana]
Length = 370
Score = 386 bits (992), Expect(2) = e-107
Identities = 183/221 (82%), Positives = 203/221 (91%)
Frame = +2
Query: 50 MPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPLDLGGSLGRDAATGCGVVYATEALL 229
+PAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKP+DLGGSLGR+AATG GVV+ATEALL
Sbjct: 138 VPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVFATEALL 197
Query: 230 AEHGKSVQGLKFAIQGFGNVGSWAGKLIHEIGGKVVAVSGVTGAIKNPNGIDIPALLKHR 409
AE+GKS+QGL F IQGFGNVG+WA KLIHE GGKVVAVS +TGAI+NP GIDI AL+KH+
Sbjct: 198 AEYGKSIQGLTFVIQGFGNVGTWAAKLIHEKGGKVVAVSDITGAIRNPEGIDINALIKHK 257
Query: 410 EDAGSLISFNGADVMNADELLGHYCDVLIPCALGGVLNRENANDVRAKFVIEAANHPTDP 589
+ GSL FNG D MN+DELL H CDVLIPCALGGVLN+ENA DV+AKF++EAANHPTDP
Sbjct: 258 DATGSLNDFNGGDAMNSDELLIHECDVLIPCALGGVLNKENAGDVKAKFIVEAANHPTDP 317
Query: 590 EADEILSKKGVIVLPDIYANAGGVTVIYFEWVQNIQGFMWD 712
+ADEILSKKGVI+LPDIYANAGGVTV YFEWVQNIQGFMW+
Sbjct: 318 DADEILSKKGVIILPDIYANAGGVTVSYFEWVQNIQGFMWE 358
Score = 27.3 bits (59), Expect(2) = e-107
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +1
Query: 7 VFTQKIHDLIGDQID 51
VFTQKIHDLIG D
Sbjct: 123 VFTQKIHDLIGIHTD 137