BLASTX nr result

ID: Bupleurum21_contig00039206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039206
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFZ78562.1| cellulose synthase [Populus tomentosa]                 161   4e-38
ref|XP_002533503.1| Cellulose synthase A catalytic subunit 6 [UD...   157   6e-37
ref|XP_002310629.1| predicted protein [Populus trichocarpa] gi|2...   157   8e-37
ref|XP_002310628.1| predicted protein [Populus trichocarpa] gi|2...   157   8e-37
gb|AAP97494.1| cellulose synthase [Solanum tuberosum]                 155   3e-36

>gb|AFZ78562.1| cellulose synthase [Populus tomentosa]
          Length = 1096

 Score =  161 bits (408), Expect = 4e-38
 Identities = 80/123 (65%), Positives = 89/123 (72%)
 Frame = +1

Query: 22   PSKTCNCWPKWCFLCCGSXXXXXXXXXXXXXXXXPKHRESSKQIHALETIEEGYEGFVTE 201
            P KTCNCWPKWC LCCGS                 K+RE+SKQIHALE IEEG E   +E
Sbjct: 668  PGKTCNCWPKWCCLCCGSRKNKKSKQKEEKKKS--KNREASKQIHALENIEEGIEESTSE 725

Query: 202  FSASTSQSKLEKKFGQSSTFVVSTLLENGGIADDSSCSSLIKEAIHVISCGYEDKTEWGK 381
             S+ TSQ KLEKKFGQS  FV STLLENGG+  D+S +SL++EAI VISCGYEDKTEWGK
Sbjct: 726  KSSETSQMKLEKKFGQSPVFVASTLLENGGVPRDASPASLLREAIQVISCGYEDKTEWGK 785

Query: 382  EVG 390
            EVG
Sbjct: 786  EVG 788


>ref|XP_002533503.1| Cellulose synthase A catalytic subunit 6 [UDP-forming], putative
           [Ricinus communis] gi|223526627|gb|EEF28872.1| Cellulose
           synthase A catalytic subunit 6 [UDP-forming], putative
           [Ricinus communis]
          Length = 828

 Score =  157 bits (398), Expect = 6e-37
 Identities = 79/126 (62%), Positives = 90/126 (71%)
 Frame = +1

Query: 13  RSAPSKTCNCWPKWCFLCCGSXXXXXXXXXXXXXXXXPKHRESSKQIHALETIEEGYEGF 192
           + AP KTCNCWPKWC LCCGS                 K+RE+SKQIHALE IEEG E  
Sbjct: 398 KKAPGKTCNCWPKWCCLCCGSRKNKKSKAKNDKKKKS-KNREASKQIHALENIEEGIES- 455

Query: 193 VTEFSASTSQSKLEKKFGQSSTFVVSTLLENGGIADDSSCSSLIKEAIHVISCGYEDKTE 372
            TE S+ T+Q KLEKKFGQS  FV S LLENGG+  D+S ++L++EAI VISCGYEDKTE
Sbjct: 456 -TEKSSETAQLKLEKKFGQSPVFVASALLENGGVPHDASPAALLREAIQVISCGYEDKTE 514

Query: 373 WGKEVG 390
           WGKEVG
Sbjct: 515 WGKEVG 520


>ref|XP_002310629.1| predicted protein [Populus trichocarpa] gi|222853532|gb|EEE91079.1|
            predicted protein [Populus trichocarpa]
          Length = 1095

 Score =  157 bits (397), Expect = 8e-37
 Identities = 79/123 (64%), Positives = 88/123 (71%)
 Frame = +1

Query: 22   PSKTCNCWPKWCFLCCGSXXXXXXXXXXXXXXXXPKHRESSKQIHALETIEEGYEGFVTE 201
            P KTCNCWPKWC L CGS                 K+RE+SKQIHALE IEEG E   +E
Sbjct: 667  PGKTCNCWPKWCCLFCGSRKNKKSKQKKEKKKS--KNREASKQIHALENIEEGIEESTSE 724

Query: 202  FSASTSQSKLEKKFGQSSTFVVSTLLENGGIADDSSCSSLIKEAIHVISCGYEDKTEWGK 381
             S+ TSQ KLEKKFGQS  FV STLLENGG+  D+S +SL++EAI VISCGYEDKTEWGK
Sbjct: 725  KSSETSQMKLEKKFGQSPVFVASTLLENGGVPRDASPASLLREAIQVISCGYEDKTEWGK 784

Query: 382  EVG 390
            EVG
Sbjct: 785  EVG 787


>ref|XP_002310628.1| predicted protein [Populus trichocarpa] gi|222853531|gb|EEE91078.1|
            predicted protein [Populus trichocarpa]
          Length = 1096

 Score =  157 bits (397), Expect = 8e-37
 Identities = 79/123 (64%), Positives = 88/123 (71%)
 Frame = +1

Query: 22   PSKTCNCWPKWCFLCCGSXXXXXXXXXXXXXXXXPKHRESSKQIHALETIEEGYEGFVTE 201
            P KTCNCWPKWC L CGS                 K+RE+SKQIHALE IEEG E   +E
Sbjct: 668  PGKTCNCWPKWCCLFCGSRKNKKSKQKKEKKKS--KNREASKQIHALENIEEGIEESTSE 725

Query: 202  FSASTSQSKLEKKFGQSSTFVVSTLLENGGIADDSSCSSLIKEAIHVISCGYEDKTEWGK 381
             S+ TSQ KLEKKFGQS  FV STLLENGG+  D+S +SL++EAI VISCGYEDKTEWGK
Sbjct: 726  KSSETSQMKLEKKFGQSPVFVASTLLENGGVPRDASPASLLREAIQVISCGYEDKTEWGK 785

Query: 382  EVG 390
            EVG
Sbjct: 786  EVG 788


>gb|AAP97494.1| cellulose synthase [Solanum tuberosum]
          Length = 994

 Score =  155 bits (392), Expect = 3e-36
 Identities = 75/123 (60%), Positives = 85/123 (69%)
 Frame = +1

Query: 22  PSKTCNCWPKWCFLCCGSXXXXXXXXXXXXXXXXPKHRESSKQIHALETIEEGYEGFVTE 201
           P KTCNCWPKWC  C GS                PK +E+S QIHALE IEEG EG  +E
Sbjct: 572 PGKTCNCWPKWCCCCFGSRKKHKKAKTTKDNKKKPKSKEASPQIHALENIEEGIEGIDSE 631

Query: 202 FSASTSQSKLEKKFGQSSTFVVSTLLENGGIADDSSCSSLIKEAIHVISCGYEDKTEWGK 381
            +A   Q KLEKKFGQS  FV STLLE+GGI   ++ +SL+KEAIHVISCGYEDKTEWGK
Sbjct: 632 KAALMPQIKLEKKFGQSPVFVASTLLEDGGIPPGATSASLLKEAIHVISCGYEDKTEWGK 691

Query: 382 EVG 390
           E+G
Sbjct: 692 EIG 694


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