BLASTX nr result

ID: Bupleurum21_contig00039201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039201
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL99208.1| DNA (cytosine-5)-methyltransferase, partial [Sile...   117   1e-24
gb|AEL99207.1| DNA (cytosine-5)-methyltransferase, partial [Sile...   111   7e-23
gb|ACX83570.1| DNA methyltransferase [Hieracium pilosella]            103   2e-20
gb|ACX83569.1| DNA methyltransferase [Hieracium piloselloides]        103   2e-20
emb|CBI27718.3| unnamed protein product [Vitis vinifera]               99   3e-19

>gb|AEL99208.1| DNA (cytosine-5)-methyltransferase, partial [Silene latifolia]
          Length = 521

 Score =  117 bits (293), Expect = 1e-24
 Identities = 67/122 (54%), Positives = 85/122 (69%), Gaps = 8/122 (6%)
 Frame = -1

Query: 344 SGGHPDLTLDELLAAVVRSMSGSKNFPTGSSIKELVLSWGEFIYEQLTGLDG------KE 183
           SGG+PD+TLDELLAA+VR+M+GSKNFP G+SIKE +LSWGEFIY QL GLD       ++
Sbjct: 185 SGGNPDITLDELLAAIVRAMNGSKNFPPGASIKEFILSWGEFIYNQLIGLDATSNKKEQK 244

Query: 182 FAELPVLVALRDESKRKADDPPSEKAL-SGEKQNNKSGETQSK-NPAQETLDKGDLKLAR 9
           F +LPVLVALRDE K+  +  PS   L +G       GET+ + N +  + +  D KLAR
Sbjct: 245 FIDLPVLVALRDECKKNGEIAPSFMPLATGGALKIGDGETKKESNSSIPSEEDEDAKLAR 304

Query: 8   LL 3
           LL
Sbjct: 305 LL 306


>gb|AEL99207.1| DNA (cytosine-5)-methyltransferase, partial [Silene latifolia]
          Length = 521

 Score =  111 bits (277), Expect = 7e-23
 Identities = 66/122 (54%), Positives = 84/122 (68%), Gaps = 8/122 (6%)
 Frame = -1

Query: 344 SGGHPDLTLDELLAAVVRSMSGSKNFPTGSSIKELVLSWGEFIYEQLTGLDG------KE 183
           SGG+PD+TLDELLAA+VR+M+GSKNFP G+SIKE +LS GEFIY QL GLD       ++
Sbjct: 185 SGGNPDITLDELLAALVRAMNGSKNFPPGASIKEFILSRGEFIYNQLIGLDATSNKKEQK 244

Query: 182 FAELPVLVALRDESKRKADDPPSEKAL-SGEKQNNKSGETQSK-NPAQETLDKGDLKLAR 9
           F +LPVLVALRDE K+  +  PS   L +G       GET+ + N +  + +  D KLAR
Sbjct: 245 FIDLPVLVALRDECKKNGEIAPSFMPLATGGALKIGDGETKKESNSSIPSEEDEDAKLAR 304

Query: 8   LL 3
           LL
Sbjct: 305 LL 306


>gb|ACX83570.1| DNA methyltransferase [Hieracium pilosella]
          Length = 1569

 Score =  103 bits (256), Expect = 2e-20
 Identities = 60/129 (46%), Positives = 83/129 (64%), Gaps = 15/129 (11%)
 Frame = -1

Query: 344 SGGHPDLTLDELLAAVVRSMSGSKNFPTGSSIKELVLSWGEFIYEQLTGLD------GKE 183
           SGG+PDL+LDELLAA+VRS+SGSKNFP G SI++L++SWG FI++QL  LD       + 
Sbjct: 234 SGGNPDLSLDELLAAIVRSLSGSKNFPHGVSIRDLIVSWGSFIFDQLVSLDDSPENADRA 293

Query: 182 FAELPVLVALRDESKRKAD----DPP-----SEKALSGEKQNNKSGETQSKNPAQETLDK 30
           F +LPVL ALRDESK+  +    + P     +   ++GEK N  +G  + +         
Sbjct: 294 FVDLPVLTALRDESKKHEEFGFVNVPKGVTNAPLKINGEKVNKSNGVEEDE--------- 344

Query: 29  GDLKLARLL 3
            D+KLAR+L
Sbjct: 345 -DMKLARVL 352


>gb|ACX83569.1| DNA methyltransferase [Hieracium piloselloides]
          Length = 1547

 Score =  103 bits (256), Expect = 2e-20
 Identities = 60/129 (46%), Positives = 83/129 (64%), Gaps = 15/129 (11%)
 Frame = -1

Query: 344 SGGHPDLTLDELLAAVVRSMSGSKNFPTGSSIKELVLSWGEFIYEQLTGLD------GKE 183
           SGG+PDL+LDELLAA+VRS+SGSKNFP G SI++L++SWG FI++QL  LD       + 
Sbjct: 215 SGGNPDLSLDELLAAIVRSLSGSKNFPHGVSIRDLIVSWGSFIFDQLVSLDDSPENADRA 274

Query: 182 FAELPVLVALRDESKRKAD----DPP-----SEKALSGEKQNNKSGETQSKNPAQETLDK 30
           F +LPVL ALRDESK+  +    + P     +   ++GEK N  +G  + +         
Sbjct: 275 FVDLPVLTALRDESKKHEEFGFVNVPNGVTNAPLKINGEKVNKSNGVEEDE--------- 325

Query: 29  GDLKLARLL 3
            D+KLAR+L
Sbjct: 326 -DMKLARVL 333


>emb|CBI27718.3| unnamed protein product [Vitis vinifera]
          Length = 1429

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 60/121 (49%), Positives = 77/121 (63%), Gaps = 7/121 (5%)
 Frame = -1

Query: 344 SGGHPDLTLDELLAAVVRSMSGSKNFPTGSSIKELVLSWGEFIYEQLTGLDGKE------ 183
           SGG+PDL+LDELLA+VVRSMS S+ F  G SIK+ ++S GEFIY QL GL+         
Sbjct: 162 SGGNPDLSLDELLASVVRSMSASRCFSGGGSIKDFIISQGEFIYNQLIGLEATSNQSDQI 221

Query: 182 FAELPVLVALRDESKRKADDPPSEKALSGEKQNNKSGETQSKNPAQETLDKG-DLKLARL 6
           FAELPVLVALRDE  ++ D   ++   SG    +        N A E+ ++  D+KLARL
Sbjct: 222 FAELPVLVALRDEGCKRGDFMKAKGGSSGGSSMSGLRIRDIGNEADESFEENDDVKLARL 281

Query: 5   L 3
           L
Sbjct: 282 L 282


Top