BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039188
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27249.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
ref|XP_002316102.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containi...   110   1e-22
ref|XP_003607763.1| Pentatricopeptide repeat-containing protein ...   110   2e-22

>emb|CBI27249.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/95 (63%), Positives = 70/95 (73%)
 Frame = -3

Query: 338 RLEEAKDFIEKMPIQPDITVLGAFLHGCNLHSGYNXXXXXXXXXXXLNPDDASYYVLMSQ 159
           RLEEA DFIEK+PIQPD+++LGAFLHGC LHS ++           L+PD A YYVLMS 
Sbjct: 593 RLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYVLMSN 652

Query: 158 LYASDGRWSQAYQVRELMKARDLNKSPALSLVDMQ 54
           LYAS+GRWSQA QV ELMK R L K P  SLVD++
Sbjct: 653 LYASEGRWSQANQVMELMKQRGLAKLPGWSLVDIE 687


>ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
           gi|147818711|emb|CAN65040.1| hypothetical protein
           VITISV_009460 [Vitis vinifera]
          Length = 700

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/95 (63%), Positives = 70/95 (73%)
 Frame = -3

Query: 338 RLEEAKDFIEKMPIQPDITVLGAFLHGCNLHSGYNXXXXXXXXXXXLNPDDASYYVLMSQ 159
           RLEEA DFIEK+PIQPD+++LGAFLHGC LHS ++           L+PD A YYVLMS 
Sbjct: 592 RLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYVLMSN 651

Query: 158 LYASDGRWSQAYQVRELMKARDLNKSPALSLVDMQ 54
           LYAS+GRWSQA QV ELMK R L K P  SLVD++
Sbjct: 652 LYASEGRWSQANQVMELMKQRGLAKLPGWSLVDIE 686


>ref|XP_002316102.1| predicted protein [Populus trichocarpa] gi|222865142|gb|EEF02273.1|
           predicted protein [Populus trichocarpa]
          Length = 665

 Score =  112 bits (279), Expect = 4e-23
 Identities = 54/94 (57%), Positives = 67/94 (71%)
 Frame = -3

Query: 338 RLEEAKDFIEKMPIQPDITVLGAFLHGCNLHSGYNXXXXXXXXXXXLNPDDASYYVLMSQ 159
           RL+EA DFI+KMP+QPD+++ GAFLHGC LHS ++           L+P DA YYVLM  
Sbjct: 557 RLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRMLELHPGDACYYVLMCN 616

Query: 158 LYASDGRWSQAYQVRELMKARDLNKSPALSLVDM 57
           LYASD RWS+  QVRELMK R L K+P  SL++M
Sbjct: 617 LYASDARWSKVKQVRELMKQRGLMKTPGCSLMEM 650


>ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Glycine max]
          Length = 699

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/93 (56%), Positives = 64/93 (68%)
 Frame = -3

Query: 335 LEEAKDFIEKMPIQPDITVLGAFLHGCNLHSGYNXXXXXXXXXXXLNPDDASYYVLMSQL 156
           LEEA DFIE+MP+QP ++V GAFLHGC LHS +            L+PD+A YYVL+S L
Sbjct: 593 LEEALDFIERMPVQPSVSVFGAFLHGCGLHSRFELGGAAIKKMLELHPDEACYYVLVSNL 652

Query: 155 YASDGRWSQAYQVRELMKARDLNKSPALSLVDM 57
           YASDGRW    QVRE++K R LNK P  S V+M
Sbjct: 653 YASDGRWGMVKQVREMIKQRGLNKVPGCSSVEM 685


>ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355508818|gb|AES89960.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 871

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/93 (55%), Positives = 65/93 (69%)
 Frame = -3

Query: 335 LEEAKDFIEKMPIQPDITVLGAFLHGCNLHSGYNXXXXXXXXXXXLNPDDASYYVLMSQL 156
           L+EA DFI+KMP+QP + V GAFLHGC LHS ++           L+PD A YYVL+S L
Sbjct: 596 LQEALDFIDKMPVQPGVGVFGAFLHGCGLHSNFDFGEVAIRRMLELHPDQACYYVLISNL 655

Query: 155 YASDGRWSQAYQVRELMKARDLNKSPALSLVDM 57
           YASDGRW    +VRE++K R LNK P +SLV+M
Sbjct: 656 YASDGRWGMVKEVREMIKQRGLNKVPGVSLVEM 688