BLASTX nr result

ID: Bupleurum21_contig00039180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039180
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635533.1| PREDICTED: LOB domain-containing protein 36-...   119   3e-25
ref|XP_002263109.2| PREDICTED: LOB domain-containing protein 36-...   118   4e-25
emb|CBI23279.3| unnamed protein product [Vitis vinifera]              118   4e-25
ref|XP_002263136.2| PREDICTED: LOW QUALITY PROTEIN: LOB domain-c...   105   3e-21
ref|XP_002263845.1| PREDICTED: LOB domain-containing protein 36-...    87   1e-15

>ref|XP_003635533.1| PREDICTED: LOB domain-containing protein 36-like, partial [Vitis
           vinifera]
          Length = 252

 Score =  119 bits (297), Expect = 3e-25
 Identities = 77/138 (55%), Positives = 85/138 (61%), Gaps = 13/138 (9%)
 Frame = +1

Query: 1   KQVQVDLFNAKKELANYIGPSAMLPILQHPG-LIQQHPSNP--QNVLSYNMQPMLGLSTN 171
           KQVQ DLF AKKEL+ YIGPSAMLPI Q  G L QQH SNP   + + YN  PMLGL T 
Sbjct: 94  KQVQNDLFTAKKELSAYIGPSAMLPIPQPAGCLPQQHMSNPCSSSQIPYNTPPMLGLPTG 153

Query: 172 QAHGTMPLVIRDXXXXXXXXXXXXL--------AVAEREQQEMIRTYEQQQQPDQ--LVR 321
             HG   LVIR+            +        AVA REQQEM+RTYEQQQQ  Q  LVR
Sbjct: 154 PTHGRQ-LVIREPHQTQQYQHRQQILEAQQIAEAVAAREQQEMLRTYEQQQQQQQQLLVR 212

Query: 322 FNNGFHNGGQVTASGYNQ 375
           FN+GF  GG V AS +NQ
Sbjct: 213 FNSGFDAGGTVGASSFNQ 230


>ref|XP_002263109.2| PREDICTED: LOB domain-containing protein 36-like [Vitis vinifera]
          Length = 292

 Score =  118 bits (296), Expect = 4e-25
 Identities = 76/137 (55%), Positives = 86/137 (62%), Gaps = 12/137 (8%)
 Frame = +1

Query: 1   KQVQVDLFNAKKELANYIGPSAMLPILQHPG-LIQQHPSNP--QNVLSYNMQPMLGLSTN 171
           KQVQ DLF AKKEL+ YIGPSAMLPI Q  G L QQH SNP   + + YN  PMLGL+T 
Sbjct: 94  KQVQNDLFTAKKELSAYIGPSAMLPIPQPAGCLPQQHMSNPCSSSQIPYNTPPMLGLATG 153

Query: 172 QAHGTMPLVIRDXXXXXXXXXXXXL--------AVAEREQQEMIRTYEQQQQPDQ-LVRF 324
             HG   LVIR+            +        AVA REQQEM+RTYEQQ+Q  Q LVRF
Sbjct: 154 PTHGRQ-LVIREPHQTQQYQHQQQILEAQQIAEAVAAREQQEMLRTYEQQRQQQQLLVRF 212

Query: 325 NNGFHNGGQVTASGYNQ 375
           N+GF  GG V AS +NQ
Sbjct: 213 NSGFDAGGTVGASSFNQ 229


>emb|CBI23279.3| unnamed protein product [Vitis vinifera]
          Length = 308

 Score =  118 bits (296), Expect = 4e-25
 Identities = 76/137 (55%), Positives = 86/137 (62%), Gaps = 12/137 (8%)
 Frame = +1

Query: 1   KQVQVDLFNAKKELANYIGPSAMLPILQHPG-LIQQHPSNP--QNVLSYNMQPMLGLSTN 171
           KQVQ DLF AKKEL+ YIGPSAMLPI Q  G L QQH SNP   + + YN  PMLGL+T 
Sbjct: 94  KQVQNDLFTAKKELSAYIGPSAMLPIPQPAGCLPQQHMSNPCSSSQIPYNTPPMLGLATG 153

Query: 172 QAHGTMPLVIRDXXXXXXXXXXXXL--------AVAEREQQEMIRTYEQQQQPDQ-LVRF 324
             HG   LVIR+            +        AVA REQQEM+RTYEQQ+Q  Q LVRF
Sbjct: 154 PTHGRQ-LVIREPHQTQQYQHQQQILEAQQIAEAVAAREQQEMLRTYEQQRQQQQLLVRF 212

Query: 325 NNGFHNGGQVTASGYNQ 375
           N+GF  GG V AS +NQ
Sbjct: 213 NSGFDAGGTVGASSFNQ 229


>ref|XP_002263136.2| PREDICTED: LOW QUALITY PROTEIN: LOB domain-containing protein 36
           [Vitis vinifera]
          Length = 283

 Score =  105 bits (263), Expect = 3e-21
 Identities = 65/135 (48%), Positives = 82/135 (60%), Gaps = 10/135 (7%)
 Frame = +1

Query: 1   KQVQVDLFNAKKELANYIGPSAMLPILQHPGLI-QQHPSNPQN--VLSYNMQPMLGLSTN 171
           KQVQ DL  AKKEL+ YIGP AM P  QHPG + QQH ++P +  ++ YNM P LGL T 
Sbjct: 94  KQVQSDLLAAKKELSAYIGPIAMQPNFQHPGYMPQQHMTSPSSSSLIPYNMSP-LGLPTG 152

Query: 172 QAHGTMPLVIRDXXXXXXXXXXXXLA-------VAEREQQEMIRTYEQQQQPDQLVRFNN 330
            +HG   LVIR+                     +A REQQEM+RT+EQQQ+  +L+RFN+
Sbjct: 153 ASHGGQ-LVIREPQPQQSQQYQHQRQNILEAQQMAAREQQEMLRTFEQQQRQQELMRFNS 211

Query: 331 GFHNGGQVTASGYNQ 375
           GF   G V A G+NQ
Sbjct: 212 GFEEAGTVGAGGFNQ 226


>ref|XP_002263845.1| PREDICTED: LOB domain-containing protein 36-like [Vitis vinifera]
          Length = 299

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 56/138 (40%), Positives = 75/138 (54%), Gaps = 13/138 (9%)
 Frame = +1

Query: 1   KQVQVDLFNAKKELANYIGPSAMLPILQHPGLI-QQHPSNP--QNVLSYNMQPMLGLSTN 171
           KQVQ DL  AKKELA YIGPSAMLP +QH   + QQ+ S+P   +V+ YNM P+LGL   
Sbjct: 94  KQVQSDLLAAKKELAAYIGPSAMLPFIQHVEYMPQQYMSDPSSSSVIPYNMSPILGLPPG 153

Query: 172 QAHGTMPLVIRDXXXXXXXXXXXXLAVAEREQ---------QEMIRTYEQQQQPDQLVRF 324
            +H    ++                 + E +Q         QE++RT+EQQ Q   L+RF
Sbjct: 154 ASHSGQLVIREPQPQQTQQYQHQQQQILEAQQLATAMAVRGQEILRTHEQQLQEQNLIRF 213

Query: 325 NNGFHNGGQV-TASGYNQ 375
           ++GF     V  AS +NQ
Sbjct: 214 DSGFDADAMVGAASSFNQ 231


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