BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039172
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             122   2e-26
gb|AAY99339.1| pol-polyprotein [Silene latifolia]                     122   4e-26
dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]                121   5e-26
ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulga...   121   5e-26
gb|AAD30632.1|AC006085_5 Hypothetical protein [Arabidopsis thali...   121   7e-26

>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  122 bits (307), Expect = 2e-26
 Identities = 52/107 (48%), Positives = 78/107 (72%)
 Frame = -2

Query: 322 VREEKGQQRPVYYVSHVLRGAEIRYSILEKLAYSLILASRKLRPYFQCHVISIYTSHPLR 143
           VRE++G+Q+P+YYVS  +   E RY+++EKLA +++ ++RKLRPYFQ H + + T+ PLR
Sbjct: 334 VREDRGEQKPIYYVSKSMTDPETRYTMMEKLALAVVTSARKLRPYFQSHPVQVLTNQPLR 393

Query: 142 KILHKPDLSGRLANWAIELGQFDLRYLPRTSIQGQAIADFIVECTTP 2
            ILH P  SGRLA WA+EL ++D+ +  R S++ Q +ADF+ E   P
Sbjct: 394 TILHSPSQSGRLAKWAVELSEYDIEFKSRISMKAQVLADFLTELPIP 440


>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
          Length = 1307

 Score =  122 bits (305), Expect = 4e-26
 Identities = 52/105 (49%), Positives = 75/105 (71%)
 Frame = -2

Query: 322 VREEKGQQRPVYYVSHVLRGAEIRYSILEKLAYSLILASRKLRPYFQCHVISIYTSHPLR 143
           +REE  QQ P+Y++SH L  AE  Y ++EK A+++++A+RKL+PYF  H +++ T  PL 
Sbjct: 623 IREEDKQQHPIYFISHTLLAAETNYPLIEKAAFAVVVAARKLKPYFNAHPVTVLTDQPLE 682

Query: 142 KILHKPDLSGRLANWAIELGQFDLRYLPRTSIQGQAIADFIVECT 8
           K L   + SGRL  WA+EL  F ++Y PR SI+GQA+ADF+ ECT
Sbjct: 683 KALENFEKSGRLIKWAVELSGFGIQYKPRPSIKGQALADFLAECT 727


>dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]
          Length = 764

 Score =  121 bits (304), Expect = 5e-26
 Identities = 54/98 (55%), Positives = 75/98 (76%)
 Frame = -2

Query: 301 QRPVYYVSHVLRGAEIRYSILEKLAYSLILASRKLRPYFQCHVISIYTSHPLRKILHKPD 122
           Q P+Y+VSHVL  AE RY +LEK++ ++++A+RKLRPYF  H I + ++HPL K L K D
Sbjct: 89  QLPIYFVSHVLNEAEQRYPLLEKMSLAVMIAARKLRPYFDAHTIQVLSNHPLEKALQKLD 148

Query: 121 LSGRLANWAIELGQFDLRYLPRTSIQGQAIADFIVECT 8
            SGRL  WA+EL +F++ Y PRT+I+ QA+ADFIVE +
Sbjct: 149 TSGRLLRWAVELSEFEVEYKPRTAIKAQALADFIVEAS 186


>ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435157|ref|YP_004222375.1| hypothetical protein
           BevumaM_p142 [Beta vulgaris subsp. maritima]
           gi|346683249|ref|YP_004842181.1| hypothetical protein
           BemaM_p137 [Beta macrocarpa] gi|9049300|dbj|BAA99310.1|
           orf764 [Beta vulgaris subsp. vulgaris]
           gi|317905608|emb|CBJ14014.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439890|emb|CBJ17590.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148045|emb|CBJ20708.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500167|emb|CBX24986.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977907|emb|CBL54131.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 764

 Score =  121 bits (304), Expect = 5e-26
 Identities = 54/98 (55%), Positives = 75/98 (76%)
 Frame = -2

Query: 301 QRPVYYVSHVLRGAEIRYSILEKLAYSLILASRKLRPYFQCHVISIYTSHPLRKILHKPD 122
           Q P+Y+VSHVL  AE RY +LEK++ ++++A+RKLRPYF  H I + ++HPL K L K D
Sbjct: 89  QLPIYFVSHVLNEAEQRYPLLEKMSLAVMIAARKLRPYFDAHTIQVLSNHPLEKALQKLD 148

Query: 121 LSGRLANWAIELGQFDLRYLPRTSIQGQAIADFIVECT 8
            SGRL  WA+EL +F++ Y PRT+I+ QA+ADFIVE +
Sbjct: 149 TSGRLLRWAVELSEFEVEYKPRTAIKAQALADFIVEAS 186


>gb|AAD30632.1|AC006085_5 Hypothetical protein [Arabidopsis thaliana]
          Length = 1295

 Score =  121 bits (303), Expect = 7e-26
 Identities = 56/103 (54%), Positives = 75/103 (72%)
 Frame = -2

Query: 322  VREEKGQQRPVYYVSHVLRGAEIRYSILEKLAYSLILASRKLRPYFQCHVISIYTSHPLR 143
            VR E+  +RP++YVS     AE RY ++EKLA +++ ++RKLRPYFQ H I + TS PLR
Sbjct: 806  VRVERSDERPIFYVSKSFSDAETRYPMMEKLALAVVTSARKLRPYFQSHPIVVLTSLPLR 865

Query: 142  KILHKPDLSGRLANWAIELGQFDLRYLPRTSIQGQAIADFIVE 14
             ILH P  SGRLA WAIEL +FDL +  RTS++ Q +ADF++E
Sbjct: 866  AILHSPSQSGRLAKWAIELSEFDLEFRARTSLKSQVLADFLIE 908