BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039146
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containi...   180   9e-44
ref|XP_002863429.1| pentatricopeptide repeat-containing protein ...   178   4e-43
ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containi...   177   6e-43
ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containi...   176   1e-42
ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|2...   175   3e-42

>ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
           [Vitis vinifera] gi|296087974|emb|CBI35257.3| unnamed
           protein product [Vitis vinifera]
          Length = 503

 Score =  180 bits (457), Expect = 9e-44
 Identities = 90/127 (70%), Positives = 100/127 (78%)
 Frame = -2

Query: 385 LIKALCKNGGTMHAALQIFHEMSHHGCSPDSYTYGTLINGLCKLKRISEAKALFAEMGAK 206
           LIKALCKN GTM AAL+IF EM + GC PDSYTYGTLINGLC+L +I EAK LF EM  K
Sbjct: 161 LIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETK 220

Query: 205 GCLPSVVTYTSLIHGLCLSNDLDEAMRLFEEMKGKCIVANVYTYSSLMDGLCKGGRCSQA 26
            C P+VVTYTSLIHGLC S DLD A+RL EEM  K I  NV+TYSSLMDG CK G  S+A
Sbjct: 221 ACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRA 280

Query: 25  LELLEIM 5
           LELL++M
Sbjct: 281 LELLDMM 287



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
 Frame = -2

Query: 343 ALQIFHEMSHHGCSPDSYTYGTLINGLCKLKRISEAKA-LFAEMGAKGCLPSVVTYTSLI 167
           AL+ +  M   G  P   +   LI  LCK     +A   +F EM  +GC P   TY +LI
Sbjct: 139 ALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLI 198

Query: 166 HGLCLSNDLDEAMRLFEEMKGKCIVANVYTYSSLMDGLCKGGRCSQALELLEIMA 2
           +GLC    + EA  LF+EM+ K     V TY+SL+ GLC+      A+ LLE MA
Sbjct: 199 NGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMA 253


>ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297309264|gb|EFH39688.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 472

 Score =  178 bits (452), Expect = 4e-43
 Identities = 88/127 (69%), Positives = 100/127 (78%)
 Frame = -2

Query: 385 LIKALCKNGGTMHAALQIFHEMSHHGCSPDSYTYGTLINGLCKLKRISEAKALFAEMGAK 206
           LIKALC+N GT+ A L+IFHEM   GC PDSYTYGTLI+GLC+  RI EAK LF EM  K
Sbjct: 162 LIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK 221

Query: 205 GCLPSVVTYTSLIHGLCLSNDLDEAMRLFEEMKGKCIVANVYTYSSLMDGLCKGGRCSQA 26
            C P+VVTYTSLI+GLC S ++DEAMR  EEMKGK I  NV+TYSSLMDGLCK GR  QA
Sbjct: 222 DCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQA 281

Query: 25  LELLEIM 5
           +EL E+M
Sbjct: 282 MELFEMM 288



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 44/127 (34%), Positives = 68/127 (53%)
 Frame = -2

Query: 385 LIKALCKNGGTMHAALQIFHEMSHHGCSPDSYTYGTLINGLCKLKRISEAKALFAEMGAK 206
           LI  LC     +  A++   EM   G  P+ +TY +L++GLCK  R  +A  LF  M A+
Sbjct: 233 LINGLC-GSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR 291

Query: 205 GCLPSVVTYTSLIHGLCLSNDLDEAMRLFEEMKGKCIVANVYTYSSLMDGLCKGGRCSQA 26
           GC P++VTYT+LI GLC    + EA+ L + M  + +  +   Y  ++ G C   +  +A
Sbjct: 292 GCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREA 351

Query: 25  LELLEIM 5
              L+ M
Sbjct: 352 ANFLDEM 358



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
 Frame = -2

Query: 385 LIKALCKNGGTMHAALQIFHEMSHHGCSPDSYTYGTLINGLCKLKRISEAKALFAEMGAK 206
           L+  LCK+G ++ A +++F  M   GC P+  TY TLI GLCK ++I EA  L   M  +
Sbjct: 268 LMDGLCKDGRSLQA-MELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326

Query: 205 GCLPSVVTYTSLIHGLCLSNDLDEAMRLFEEMKGKCIVAN-------VYTYSSLMDGLC 50
           G  P    Y  +I G C  +   EA    +EM    I  N       V T + ++ GLC
Sbjct: 327 GLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC 385


>ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Glycine max]
          Length = 479

 Score =  177 bits (450), Expect = 6e-43
 Identities = 90/127 (70%), Positives = 101/127 (79%)
 Frame = -2

Query: 385 LIKALCKNGGTMHAALQIFHEMSHHGCSPDSYTYGTLINGLCKLKRISEAKALFAEMGAK 206
           LIKALCKN  T+ +AL+IF EM + GC PDSYTYGTLINGLC+L  ISEAK LF EM  K
Sbjct: 161 LIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQK 220

Query: 205 GCLPSVVTYTSLIHGLCLSNDLDEAMRLFEEMKGKCIVANVYTYSSLMDGLCKGGRCSQA 26
           G   SVVTYTSLIHGLC SN+LDEA+ L EEMK   I  NV+TYSSLMDGLCKGG  SQA
Sbjct: 221 GFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQA 280

Query: 25  LELLEIM 5
           ++LLE+M
Sbjct: 281 MQLLEVM 287



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/127 (33%), Positives = 70/127 (55%)
 Frame = -2

Query: 385 LIKALCKNGGTMHAALQIFHEMSHHGCSPDSYTYGTLINGLCKLKRISEAKALFAEMGAK 206
           LI  LC++   +  A+ +  EM  +   P+ +TY +L++GLCK    S+A  L   M  K
Sbjct: 232 LIHGLCQSNN-LDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKK 290

Query: 205 GCLPSVVTYTSLIHGLCLSNDLDEAMRLFEEMKGKCIVANVYTYSSLMDGLCKGGRCSQA 26
             LP++VTY++LI+GLC    L EA+ + + M+ + +  N   Y  ++ GLC  G   +A
Sbjct: 291 HHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEA 350

Query: 25  LELLEIM 5
              ++ M
Sbjct: 351 ANFIDEM 357



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 7/134 (5%)
 Frame = -2

Query: 385 LIKALCKNGGTMHAALQIFHEMSHHGCSPDSYTYGTLINGLCKLKRISEAKALFAEMGAK 206
           LI  LCK    +  A++I   M   G  P++  YG +I+GLC      EA     EM   
Sbjct: 302 LINGLCKER-KLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLG 360

Query: 205 GCLPS-------VVTYTSLIHGLCLSNDLDEAMRLFEEMKGKCIVANVYTYSSLMDGLCK 47
           G  P+       V  +  ++ GLC + D   A +L+  M+ +CI   + T+  L+   CK
Sbjct: 361 GISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCK 420

Query: 46  GGRCSQALELLEIM 5
            G   +A  +LE M
Sbjct: 421 RGDLHKAARILEEM 434


>ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
           gi|449484609|ref|XP_004156929.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
          Length = 501

 Score =  176 bits (447), Expect = 1e-42
 Identities = 84/127 (66%), Positives = 98/127 (77%)
 Frame = -2

Query: 385 LIKALCKNGGTMHAALQIFHEMSHHGCSPDSYTYGTLINGLCKLKRISEAKALFAEMGAK 206
           LIKA CKN GTM  A+ +F  MS+HGC PDSYTYGTLINGLC+ + I EAK L  EM  K
Sbjct: 190 LIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETK 249

Query: 205 GCLPSVVTYTSLIHGLCLSNDLDEAMRLFEEMKGKCIVANVYTYSSLMDGLCKGGRCSQA 26
           GC PSVVTYTS+IHGLC  N++DEAMRL E+MK K I  NV+TYSSLMDG CK G  S+A
Sbjct: 250 GCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRA 309

Query: 25  LELLEIM 5
            ++LE+M
Sbjct: 310 RDILELM 316



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/127 (26%), Positives = 68/127 (53%)
 Frame = -2

Query: 385 LIKALCKNGGTMHAALQIFHEMSHHGCSPDSYTYGTLINGLCKLKRISEAKALFAEMGAK 206
           +I  LC+    +  A+++  +M      P+ +TY +L++G CK    S A+ +   M  K
Sbjct: 261 IIHGLCQLNN-VDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQK 319

Query: 205 GCLPSVVTYTSLIHGLCLSNDLDEAMRLFEEMKGKCIVANVYTYSSLMDGLCKGGRCSQA 26
              P++++Y++L++GLC    ++EA+ +F+ MK +    +   Y  +++ LC   R  +A
Sbjct: 320 RLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEA 379

Query: 25  LELLEIM 5
              L+ M
Sbjct: 380 ANFLDEM 386



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 7/134 (5%)
 Frame = -2

Query: 385 LIKALCKNGGTMHAALQIFHEMSHHGCSPDSYTYGTLINGLCKLKRISEAKALFAEMGAK 206
           L+  LC N G ++ AL+IF  M   G  PD+  YG ++N LC + R  EA     EM   
Sbjct: 331 LLNGLC-NEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLC 389

Query: 205 GCLPSVVTYT-------SLIHGLCLSNDLDEAMRLFEEMKGKCIVANVYTYSSLMDGLCK 47
           G  P+ +T++        +IHGLC  N+ + A +L+  +  + I   V T++SL+   C 
Sbjct: 390 GIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISITVDTFNSLLKCFCN 449

Query: 46  GGRCSQALELLEIM 5
                +   +L+ M
Sbjct: 450 KKDLPKTSRILDEM 463



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
 Frame = -2

Query: 385 LIKALCKNGGTMHAALQIFHEMSHHGCSPDSYTYGTLINGLCKLKRISEAKALFAEMGAK 206
           L+   CK G +  A   I   M      P+  +Y TL+NGLC   +I+EA  +F  M  +
Sbjct: 296 LMDGFCKTGHSSRAR-DILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQ 354

Query: 205 GCLPSVVTYTSLIHGLCLSNDLDEAMRLFEEMKGKCIVAN-------VYTYSSLMDGLCK 47
           G  P    Y  +++ LC  +   EA    +EM    I  N       V T++ ++ GLC 
Sbjct: 355 GFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCT 414

Query: 46  GGRCSQALEL 17
               ++A +L
Sbjct: 415 INNSNRAFQL 424


>ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|222870863|gb|EEF07994.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  175 bits (444), Expect = 3e-42
 Identities = 85/127 (66%), Positives = 99/127 (77%)
 Frame = -2

Query: 385 LIKALCKNGGTMHAALQIFHEMSHHGCSPDSYTYGTLINGLCKLKRISEAKALFAEMGAK 206
           LIKALCKN GT+ AA +IF EM   GC PDSYTYGTLINGLCKL +  EAK LF EM  K
Sbjct: 161 LIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTK 220

Query: 205 GCLPSVVTYTSLIHGLCLSNDLDEAMRLFEEMKGKCIVANVYTYSSLMDGLCKGGRCSQA 26
           GC PSVVTY+ L+HGLC + ++DEAM LF++MK K I  NV+TYSSLMDGLCK G   +A
Sbjct: 221 GCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEA 280

Query: 25  LELLEIM 5
           +ELLE+M
Sbjct: 281 MELLEMM 287



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 35/162 (21%)
 Frame = -2

Query: 385 LIKALCKNGGTMHAALQIFHEMSHHGCSPDSYTYGTLINGLCKLKRISEAKALFAEMGAK 206
           LI  LCK G T  A  ++F EM   GCSP   TY  L++GLC+   + EA  LF +M  K
Sbjct: 197 LINGLCKLGKTFEAK-ELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKK 255

Query: 205 GCLPSV-----------------------------------VTYTSLIHGLCLSNDLDEA 131
              P+V                                   VTY++LI+GLC    L EA
Sbjct: 256 AIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEA 315

Query: 130 MRLFEEMKGKCIVANVYTYSSLMDGLCKGGRCSQALELLEIM 5
           +   + MK + +  +   Y  +++G C   +  +A   L+ M
Sbjct: 316 VETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEM 357



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 7/130 (5%)
 Frame = -2

Query: 385 LIKALCKNGGTMHAALQIFHEMSHHGCSPDSYTYGTLINGLCKLKRISEAKALFAEMGAK 206
           L+  LCKNGG++ A +++   M      P+  TY TLINGLCK  +++EA      M  +
Sbjct: 267 LMDGLCKNGGSLEA-MELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQ 325

Query: 205 GCLPSVVTYTSLIHGLCLSNDLDEAMRLFEEMKGKCIVANVYTYS-------SLMDGLCK 47
           G  P    Y  +I+G C      EA    +EM    I  N  T+S        ++ GLC 
Sbjct: 326 GLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCT 385

Query: 46  GGRCSQALEL 17
            G  +++ +L
Sbjct: 386 NGNLNRSFQL 395



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
 Frame = -2

Query: 385 LIKALCKNGGTMHAALQIFHEMSHHGCSPDSYTYGTLINGLCKLKRISEAKALFAEMGAK 206
           LI  LCK G  +  A++    M   G  PD+  YG +ING C +++  EA     EM   
Sbjct: 302 LINGLCKEG-KLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLG 360

Query: 205 GCLPSVVTYT-------SLIHGLCLSNDLDEAMRLFEEMKGKCIVANVYTYSSLMDGLCK 47
              P+ VT++        ++ GLC + +L+ + +L+  M+ + I  +  T+ SL+   CK
Sbjct: 361 QISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCK 420

Query: 46  GGRCSQALELLEIM 5
            G   +A  + + M
Sbjct: 421 KGDLHKAARIFDEM 434