BLASTX nr result

ID: Bupleurum21_contig00039132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039132
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602418.1| Stomatin-like protein [Medicago truncatula] ...   136   2e-30
gb|AFN88207.1| integrase core domain containing protein [Phaseol...   135   3e-30
gb|AAO26690.1|AF478377_1 gag-pol polyprotein [Vitis vinifera]         135   5e-30
emb|CAN65144.1| hypothetical protein VITISV_026080 [Vitis vinifera]   134   6e-30
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]   134   8e-30

>ref|XP_003602418.1| Stomatin-like protein [Medicago truncatula]
           gi|355491466|gb|AES72669.1| Stomatin-like protein
           [Medicago truncatula]
          Length = 605

 Score =  136 bits (343), Expect = 2e-30
 Identities = 58/108 (53%), Positives = 86/108 (79%)
 Frame = +3

Query: 6   LLLGHSPIAWKSKKQSVVARSTAEAEYRSLAMTVCEVMWVKQLLTELGLQNLGTTTIFCD 185
           ++LG+SPI+WK+KKQ VV+RS+AE+EYRS+A T CE+ WVK +L  LG+ +     ++CD
Sbjct: 470 VILGNSPISWKTKKQQVVSRSSAESEYRSMANTTCELKWVKSILCSLGISHSMPMQLYCD 529

Query: 186 NKAALAIAANPVHHEKTKHVEIDCHFIRDKALEGHISPTYVPTSSQVA 329
           +++AL IA NPV HE+TKH+E+DCHF+R++ L G + P+YV T +Q+A
Sbjct: 530 SQSALHIAKNPVFHERTKHIELDCHFVRNEILHGQLQPSYVSTHAQLA 577


>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
          Length = 1387

 Score =  135 bits (340), Expect = 3e-30
 Identities = 61/109 (55%), Positives = 86/109 (78%)
 Frame = +3

Query: 3    CLLLGHSPIAWKSKKQSVVARSTAEAEYRSLAMTVCEVMWVKQLLTELGLQNLGTTTIFC 182
            C+ +G + I+WKSKKQSVVARS+AEAEYR++A   CE++W+KQLL EL   ++   T+ C
Sbjct: 1251 CVSIGDNLISWKSKKQSVVARSSAEAEYRAMASATCELIWLKQLLKELQFGDVTQMTLIC 1310

Query: 183  DNKAALAIAANPVHHEKTKHVEIDCHFIRDKALEGHISPTYVPTSSQVA 329
            DN+AAL I++NPV HE+TKH+EIDCHFIR+K + G I   +V +++Q+A
Sbjct: 1311 DNQAALHISSNPVFHERTKHIEIDCHFIREKIISGDIKTEFVNSNNQLA 1359


>gb|AAO26690.1|AF478377_1 gag-pol polyprotein [Vitis vinifera]
          Length = 326

 Score =  135 bits (339), Expect = 5e-30
 Identities = 59/108 (54%), Positives = 83/108 (76%)
 Frame = +3

Query: 3   CLLLGHSPIAWKSKKQSVVARSTAEAEYRSLAMTVCEVMWVKQLLTELGLQNLGTTTIFC 182
           C+  G + +AWKSKKQSVV+RS+AE+EYR++A   CE++W+ QLL E+G++      ++C
Sbjct: 190 CVFFGGNLVAWKSKKQSVVSRSSAESEYRAMAQATCEIIWIHQLLCEVGMKCTMPAKLWC 249

Query: 183 DNKAALAIAANPVHHEKTKHVEIDCHFIRDKALEGHISPTYVPTSSQV 326
           DN+AAL IAANPV+HE+TKH+E+DCHFIR+K  E  +S  YV T  Q+
Sbjct: 250 DNQAALHIAANPVYHERTKHIEVDCHFIREKIEENLVSTDYVKTGEQL 297


>emb|CAN65144.1| hypothetical protein VITISV_026080 [Vitis vinifera]
          Length = 1220

 Score =  134 bits (338), Expect = 6e-30
 Identities = 59/108 (54%), Positives = 83/108 (76%)
 Frame = +3

Query: 3    CLLLGHSPIAWKSKKQSVVARSTAEAEYRSLAMTVCEVMWVKQLLTELGLQNLGTTTIFC 182
            C+  G + +AWKSKKQSVV+RS+AE+EYR++A   CE++W+ QLL E+G++      ++C
Sbjct: 1084 CVFFGGNLVAWKSKKQSVVSRSSAESEYRAMAQATCEIIWIHQLLCEVGMKCTMPAKLWC 1143

Query: 183  DNKAALAIAANPVHHEKTKHVEIDCHFIRDKALEGHISPTYVPTSSQV 326
            DN+AAL IAANPV+HE+TKH+E+DCHFIR+K  E  +S  YV T  Q+
Sbjct: 1144 DNQAALHIAANPVYHERTKHIEVDCHFIREKIEENLVSTGYVKTGEQL 1191


>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
          Length = 1461

 Score =  134 bits (337), Expect = 8e-30
 Identities = 58/108 (53%), Positives = 83/108 (76%)
 Frame = +3

Query: 6    LLLGHSPIAWKSKKQSVVARSTAEAEYRSLAMTVCEVMWVKQLLTELGLQNLGTTTIFCD 185
            + LG SPI+WK+KKQ  V+RS+AEAEYR++A   CE+ W+K LL  LG+ +     +FCD
Sbjct: 1326 VFLGQSPISWKTKKQHTVSRSSAEAEYRAMAAVTCELKWLKGLLLSLGMHHPKAIKLFCD 1385

Query: 186  NKAALAIAANPVHHEKTKHVEIDCHFIRDKALEGHISPTYVPTSSQVA 329
            +++AL +A NPV HE+TKH+E+DCHF+RD   +G I+P+YVPT +Q+A
Sbjct: 1386 SQSALHMAKNPVFHERTKHIEVDCHFVRDAITDGLIAPSYVPTVTQLA 1433


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