BLASTX nr result

ID: Bupleurum21_contig00039131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039131
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330346.1| predicted protein [Populus trichocarpa] gi|2...   192   2e-47
ref|XP_002315557.1| predicted protein [Populus trichocarpa] gi|2...   191   4e-47
ref|XP_002516907.1| conserved hypothetical protein [Ricinus comm...   190   9e-47
ref|XP_002339831.1| predicted protein [Populus trichocarpa] gi|2...   187   6e-46
ref|XP_003550251.1| PREDICTED: uncharacterized protein LOC100812...   185   3e-45

>ref|XP_002330346.1| predicted protein [Populus trichocarpa] gi|222871550|gb|EEF08681.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score =  192 bits (489), Expect = 2e-47
 Identities = 95/110 (86%), Positives = 100/110 (90%), Gaps = 5/110 (4%)
 Frame = -1

Query: 350 GVWVFKNGVVRLVENPGADSLEGSRH-----RKMLVHVPSNEVITSYAVLERKLMMLGWE 186
           GVWVFKNGVVRLVENPGA+SL+GSR      RK+LVH PSNEVITSYAVLERKL  LGWE
Sbjct: 3   GVWVFKNGVVRLVENPGAESLDGSRQGSNTRRKVLVHTPSNEVITSYAVLERKLSSLGWE 62

Query: 185 RYYDDPDLLQFHKRSTVHLISLPKDFNKFKSMHMFDIVVKNRNVFEVRDM 36
           RYYDDPDLLQFH RSTVHLISLPKDFNKFKSMHM+DIVVKNRN+FEVRDM
Sbjct: 63  RYYDDPDLLQFHIRSTVHLISLPKDFNKFKSMHMYDIVVKNRNMFEVRDM 112


>ref|XP_002315557.1| predicted protein [Populus trichocarpa] gi|222864597|gb|EEF01728.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score =  191 bits (486), Expect = 4e-47
 Identities = 94/110 (85%), Positives = 100/110 (90%), Gaps = 5/110 (4%)
 Frame = -1

Query: 350 GVWVFKNGVVRLVENPGADSLEGSRH-----RKMLVHVPSNEVITSYAVLERKLMMLGWE 186
           GVWVFKNGVVRLVENPGA+SL+GSR      RK+LVH PSNEVITSYAVLERKL  LGWE
Sbjct: 3   GVWVFKNGVVRLVENPGAESLDGSRQGSSMRRKVLVHSPSNEVITSYAVLERKLYSLGWE 62

Query: 185 RYYDDPDLLQFHKRSTVHLISLPKDFNKFKSMHMFDIVVKNRNVFEVRDM 36
           RYYDDPDLLQFHKRSTVHLISLPKDFNK +SMHM+DIVVKNRN+FEVRDM
Sbjct: 63  RYYDDPDLLQFHKRSTVHLISLPKDFNKLRSMHMYDIVVKNRNMFEVRDM 112


>ref|XP_002516907.1| conserved hypothetical protein [Ricinus communis]
           gi|223543995|gb|EEF45521.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 112

 Score =  190 bits (483), Expect = 9e-47
 Identities = 92/110 (83%), Positives = 100/110 (90%), Gaps = 5/110 (4%)
 Frame = -1

Query: 350 GVWVFKNGVVRLVENPGADSLEGSRH-----RKMLVHVPSNEVITSYAVLERKLMMLGWE 186
           GVWVFKNGVVRLVENPGA+SL+GSR      RK+LVH PSNE+ITSY+VLE KL  LGWE
Sbjct: 3   GVWVFKNGVVRLVENPGAESLDGSRQGSTARRKVLVHTPSNEIITSYSVLEHKLYSLGWE 62

Query: 185 RYYDDPDLLQFHKRSTVHLISLPKDFNKFKSMHMFDIVVKNRNVFEVRDM 36
           RYYDDPDLLQFHKRSTVHLISLPKDF+KFKSMHM+DIVVKNRN+FEVRDM
Sbjct: 63  RYYDDPDLLQFHKRSTVHLISLPKDFSKFKSMHMYDIVVKNRNMFEVRDM 112


>ref|XP_002339831.1| predicted protein [Populus trichocarpa] gi|222832325|gb|EEE70802.1|
           predicted protein [Populus trichocarpa]
          Length = 108

 Score =  187 bits (476), Expect = 6e-46
 Identities = 92/108 (85%), Positives = 98/108 (90%), Gaps = 5/108 (4%)
 Frame = -1

Query: 344 WVFKNGVVRLVENPGADSLEGSRH-----RKMLVHVPSNEVITSYAVLERKLMMLGWERY 180
           WVFKNGVVRLVENPGA+SL+GSR      RK+LVH PSNEVITSYAVLERKL  LGWERY
Sbjct: 1   WVFKNGVVRLVENPGAESLDGSRQGSSMRRKVLVHSPSNEVITSYAVLERKLYSLGWERY 60

Query: 179 YDDPDLLQFHKRSTVHLISLPKDFNKFKSMHMFDIVVKNRNVFEVRDM 36
           YDDPDLLQFHKRSTVHLISLPKDFNK +SMHM+DIVVKNRN+FEVRDM
Sbjct: 61  YDDPDLLQFHKRSTVHLISLPKDFNKLRSMHMYDIVVKNRNMFEVRDM 108


>ref|XP_003550251.1| PREDICTED: uncharacterized protein LOC100812106 [Glycine max]
          Length = 109

 Score =  185 bits (470), Expect = 3e-45
 Identities = 90/107 (84%), Positives = 97/107 (90%), Gaps = 2/107 (1%)
 Frame = -1

Query: 350 GVWVFKNGVVRLVENPGADSLEGSR--HRKMLVHVPSNEVITSYAVLERKLMMLGWERYY 177
           GVWVFKNGVVRLVENPG +++EGSR   RK+LVH  SNEVITSYAVLERKL  LGWERYY
Sbjct: 3   GVWVFKNGVVRLVENPGGEAVEGSRGGRRKVLVHRASNEVITSYAVLERKLYSLGWERYY 62

Query: 176 DDPDLLQFHKRSTVHLISLPKDFNKFKSMHMFDIVVKNRNVFEVRDM 36
           DDPDLLQFHKRSTVHLISLP+DFNKFK MHM+DIVVKN+N FEVRDM
Sbjct: 63  DDPDLLQFHKRSTVHLISLPRDFNKFKPMHMYDIVVKNKNAFEVRDM 109


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