BLASTX nr result

ID: Bupleurum21_contig00039117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039117
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262895.2| PREDICTED: uncharacterized protein L728-like...   105   5e-21
ref|XP_002304655.1| predicted protein [Populus trichocarpa] gi|2...   104   6e-21
emb|CAN69580.1| hypothetical protein VITISV_044180 [Vitis vinifera]   101   7e-20
ref|XP_003632014.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   100   2e-19
emb|CBI23616.3| unnamed protein product [Vitis vinifera]              100   2e-19

>ref|XP_002262895.2| PREDICTED: uncharacterized protein L728-like isoform 1 [Vitis
           vinifera]
          Length = 647

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/112 (47%), Positives = 74/112 (66%), Gaps = 2/112 (1%)
 Frame = +2

Query: 2   KSDKEGFYKAAIWLHNNHPKTLACNARVYAEFGYFKDLLEILFRLIQGDDAREIMKKEWK 181
           KSDKEG+Y A +WLH  HPKT ACN   +A FGY+KDLLEILFRL++G D R I K + +
Sbjct: 119 KSDKEGYYTAGLWLHGLHPKTFACNVESFANFGYYKDLLEILFRLLEGPDVRRIAKSQRR 178

Query: 182 LK-KRNGGRGVRKTI-EFKPDSRKKKEEKLRALIPKEVRIEANNVKMMEDKQ 331
           +K K+ G   VRK I       + KK +K + ++P+EVR++A   +   +K+
Sbjct: 179 MKNKKRGNYFVRKFIFGHGKLGKNKKTKKGKHVLPREVRVKAEMERAKAEKE 230


>ref|XP_002304655.1| predicted protein [Populus trichocarpa] gi|222842087|gb|EEE79634.1|
           predicted protein [Populus trichocarpa]
          Length = 651

 Score =  104 bits (260), Expect = 6e-21
 Identities = 53/101 (52%), Positives = 65/101 (64%)
 Frame = +2

Query: 2   KSDKEGFYKAAIWLHNNHPKTLACNARVYAEFGYFKDLLEILFRLIQGDDAREIMKKEWK 181
           KSDKEGFY +AIWLHNNHPKTLACN    A+FGYFKDL EIL+RL++G D R+I K+EW+
Sbjct: 113 KSDKEGFYTSAIWLHNNHPKTLACNIPSMADFGYFKDLPEILYRLLEGPDVRKIQKQEWR 172

Query: 182 LKKRNGGRGVRKTIEFKPDSRKKKEEKLRALIPKEVRIEAN 304
            +K   GR   +   FK    K      R+  PK  +   N
Sbjct: 173 QRK---GRKTGRRAGFKIGQPKTLAPFQRSKRPKNAKSSRN 210


>emb|CAN69580.1| hypothetical protein VITISV_044180 [Vitis vinifera]
          Length = 624

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/81 (56%), Positives = 59/81 (72%)
 Frame = +2

Query: 2   KSDKEGFYKAAIWLHNNHPKTLACNARVYAEFGYFKDLLEILFRLIQGDDAREIMKKEWK 181
           KSDKEGFY A +WLH++HPKTLACNARV A FGYFKD LEIL+RL++G + R I KK+W 
Sbjct: 113 KSDKEGFYTAVLWLHDHHPKTLACNARVLASFGYFKDFLEILYRLLEGPEIRRIEKKDWL 172

Query: 182 LKKRNGGRGVRKTIEFKPDSR 244
            +K       ++   FK ++R
Sbjct: 173 DRKGRKKNSRKRNSIFKRENR 193


>ref|XP_003632014.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein L728-like
           [Vitis vinifera]
          Length = 651

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/81 (56%), Positives = 58/81 (71%)
 Frame = +2

Query: 2   KSDKEGFYKAAIWLHNNHPKTLACNARVYAEFGYFKDLLEILFRLIQGDDAREIMKKEWK 181
           KSDKEGFY A +WLH++HPKTLACNARV A FGYFKD LEIL+RL++G   R I KK+W 
Sbjct: 109 KSDKEGFYTAVLWLHDHHPKTLACNARVLASFGYFKDFLEILYRLLEGPKIRRIEKKDWL 168

Query: 182 LKKRNGGRGVRKTIEFKPDSR 244
            +K       ++   FK ++R
Sbjct: 169 DRKGRKKNSRKRNSIFKRENR 189


>emb|CBI23616.3| unnamed protein product [Vitis vinifera]
          Length = 463

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/81 (56%), Positives = 58/81 (71%)
 Frame = +2

Query: 2   KSDKEGFYKAAIWLHNNHPKTLACNARVYAEFGYFKDLLEILFRLIQGDDAREIMKKEWK 181
           KSDKEGFY A +WLH++HPKTLACNARV A FGYFKD LEIL+RL++G   R I KK+W 
Sbjct: 82  KSDKEGFYTAVLWLHDHHPKTLACNARVLASFGYFKDFLEILYRLLEGPKIRRIEKKDWL 141

Query: 182 LKKRNGGRGVRKTIEFKPDSR 244
            +K       ++   FK ++R
Sbjct: 142 DRKGRKKNSRKRNSIFKRENR 162


Top