BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039099
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]                   89   3e-16
gb|ADB85436.1| putative retrotransposon protein [Phyllostachys e...    89   5e-16
gb|ADB85414.1| putative retrotransposon protein [Phyllostachys e...    87   1e-15
gb|ADB85317.1| putative retrotransposon protein [Phyllostachys e...    87   2e-15
gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...    86   2e-15

>emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]
          Length = 2097

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 43/94 (45%), Positives = 64/94 (68%)
 Frame = +2

Query: 2    DEVRDKAVEHMKAYKQKTIDYFSKKVRPRQYSQGELVLRATEASDPNNQGKLSPNWEGPY 181
            +E R++A+     Y+Q    Y S+KV+PR  + G+LVLR  ++    N+ KLSP WEGPY
Sbjct: 2005 EERRNQALVRSAVYQQAMRRYHSRKVQPRSLAVGDLVLRKIQSQ--TNRNKLSPKWEGPY 2062

Query: 182  KIIKVIRPGTYRLATMDGQEIANTWHGLRLRKFY 283
             +++V RPG+ RLA  DGQ ++N+W+  +LRKFY
Sbjct: 2063 TVVEVTRPGSVRLAMSDGQILSNSWNIDQLRKFY 2096


>gb|ADB85436.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 490

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/94 (44%), Positives = 64/94 (68%)
 Frame = +2

Query: 2   DEVRDKAVEHMKAYKQKTIDYFSKKVRPRQYSQGELVLRATEASDPNNQGKLSPNWEGPY 181
           +E R++A+     Y+Q    Y+ +KV+PR  + G+LVLR  ++   +N+ KLSP WEGPY
Sbjct: 398 EERRNQALIRSAVYQQALRRYYDRKVQPRSLAVGDLVLRLCQSK--SNRNKLSPKWEGPY 455

Query: 182 KIIKVIRPGTYRLATMDGQEIANTWHGLRLRKFY 283
            +++V RPG+ RLA  DGQ + N+W+  +LRKFY
Sbjct: 456 TVVEVTRPGSVRLAMEDGQVLLNSWNIDQLRKFY 489


>gb|ADB85414.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1429

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 43/94 (45%), Positives = 63/94 (67%)
 Frame = +2

Query: 2    DEVRDKAVEHMKAYKQKTIDYFSKKVRPRQYSQGELVLRATEASDPNNQGKLSPNWEGPY 181
            +E R++A+     Y+Q    Y S KV+PR  + G+LVLR  +  +  N+ KLSP WEGPY
Sbjct: 1337 EERRNQALVRSAVYQQAMRRYHSHKVQPRSLTVGDLVLRKIQ--NQANRNKLSPKWEGPY 1394

Query: 182  KIIKVIRPGTYRLATMDGQEIANTWHGLRLRKFY 283
             +++V RPG+ RLA  DGQ ++N+W+  +LRKFY
Sbjct: 1395 TVVEVTRPGSVRLAMSDGQILSNSWNIDQLRKFY 1428


>gb|ADB85317.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 422

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/94 (43%), Positives = 64/94 (68%)
 Frame = +2

Query: 2   DEVRDKAVEHMKAYKQKTIDYFSKKVRPRQYSQGELVLRATEASDPNNQGKLSPNWEGPY 181
           +E R++A+     Y+Q    Y+ + V+PR  + G+LVLR  ++   +N+ KLSP WEGPY
Sbjct: 330 EERRNQALIRSAIYQQALRRYYDRMVQPRSLAVGDLVLRLCQSK--SNRNKLSPKWEGPY 387

Query: 182 KIIKVIRPGTYRLATMDGQEIANTWHGLRLRKFY 283
            +++V RPG+ RLA  DGQ ++N+W+  +LRKFY
Sbjct: 388 TVVEVTRPGSVRLAMEDGQVLSNSWNIDQLRKFY 421


>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 39/95 (41%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
 Frame = +2

Query: 2    DEVRDKAVEHMKAYKQKTIDYFSKKVRPRQYSQGELVLRAT-EASDPNNQGKLSPNWEGP 178
            +E RD+A+  ++ Y+Q    +++KKV+ R +++G+LVLR   E +   + GKL  +WEGP
Sbjct: 1692 EEQRDQALLRIQNYQQAAAKFYNKKVKNRLFAEGDLVLRKVFENTVEQDAGKLGAHWEGP 1751

Query: 179  YKIIKVIRPGTYRLATMDGQEIANTWHGLRLRKFY 283
            Y I KV++PG Y L TMDG  I  +W+   L+++Y
Sbjct: 1752 YLISKVVKPGVYELLTMDGTPIPRSWNSANLKRYY 1786