BLASTX nr result

ID: Bupleurum21_contig00039066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039066
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_198875.1| cysteine/histidine-rich C1 domain-containing pr...    67   2e-09
ref|NP_199165.1| cysteine/histidine-rich C1 domain-containing pr...    65   4e-09
ref|XP_002863648.1| predicted protein [Arabidopsis lyrata subsp....    62   4e-08
ref|NP_181966.1| cysteine/histidine-rich C1 domain-containing pr...    59   4e-07
ref|XP_002268034.2| PREDICTED: uncharacterized protein LOC100244...    59   5e-07

>ref|NP_198875.1| cysteine/histidine-rich C1 domain-containing protein [Arabidopsis
           thaliana] gi|9758085|dbj|BAB08529.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|38454132|gb|AAR20760.1| At5g40590 [Arabidopsis
           thaliana] gi|38604024|gb|AAR24755.1| At5g40590
           [Arabidopsis thaliana] gi|332007187|gb|AED94570.1|
           cysteine/histidine-rich C1 domain-containing protein
           [Arabidopsis thaliana]
          Length = 234

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3   SCKNCDFWIHRNCAASTTTIYTPDLHHHPVQLIFAIPDVHRSCDRFCGKCKKLVRKNYWS 182
           +C  C + +H  C +   T+   D H HP+ L++  P         C  C+ +V  N WS
Sbjct: 99  NCSICQYDVHVGCVSMPETVKRED-HPHPLTLLYGSPYNQPGLVSKCDVCEDIVPDNLWS 157

Query: 183 YYCRECTYFVHI-GCATSWETKKQTEKDQGTE 275
           YYC+EC Y  H+  C    E KK+ +K +G++
Sbjct: 158 YYCKECDYATHLHSCKKEEEAKKEDQKGEGSK 189


>ref|NP_199165.1| cysteine/histidine-rich C1 domain-containing protein [Arabidopsis
           thaliana] gi|10178191|dbj|BAB11615.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332007593|gb|AED94976.1| cysteine/histidine-rich C1
           domain-containing protein [Arabidopsis thaliana]
          Length = 250

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
 Frame = +3

Query: 6   CKNCDFWIHRNCAASTTTIYTPDLHHHPVQLIFAIPDVHRSCDRF-CGKCKKLVRKNYWS 182
           C NC++ +H  CA    T+   D H HP+ L++  P   R    F C  C + + ++ W 
Sbjct: 111 CSNCNYSLHVGCAFIPETVDRED-HEHPLTLLYCTPCKGREDTYFTCSACDETISEDLWM 169

Query: 183 YYCRECTYFVHIGCATSWETKKQTEKDQGTE 275
           YYC++C Y  H+    ++E + + E+D+  E
Sbjct: 170 YYCKDCDYGTHLHSCAAYEDQGKEEEDEDEE 200


>ref|XP_002863648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309483|gb|EFH39907.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 239

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
 Frame = +3

Query: 12  NCDFWIHRNCAASTTTIYTPDLHHHPVQLIFAIPDVHRSCDRF-CGKCKKLVRKNYWSYY 188
           NC++ +H  CA    T+   D H HP+ L++  P   R    F C  C + + ++ W YY
Sbjct: 99  NCNYNLHVGCAFIPETVDRED-HEHPLTLLYCTPCKGREDTIFTCSVCDETISEDLWMYY 157

Query: 189 CRECTYFVHIGCATSWETKKQTEKDQGTEVLHGVVS 296
           C+EC Y  H+    ++E ++  E+++  E   G  S
Sbjct: 158 CKECDYGTHVHSCAAYEDQESNEEEEEEEDEEGEAS 193


>ref|NP_181966.1| cysteine/histidine-rich C1 domain-containing protein [Arabidopsis
           thaliana] gi|3128201|gb|AAC16105.1| unknown protein
           [Arabidopsis thaliana] gi|37202108|gb|AAQ89669.1|
           At2g44380 [Arabidopsis thaliana]
           gi|51971661|dbj|BAD44495.1| unknown protein [Arabidopsis
           thaliana] gi|330255320|gb|AEC10414.1|
           cysteine/histidine-rich C1 domain-containing protein
           [Arabidopsis thaliana]
          Length = 247

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
 Frame = +3

Query: 3   SCKNCDFWIHRNCAASTTTIYTPDLHHHPVQLIFAIPDVHRS--CDRFCGKCKKLVRKNY 176
           +C  C + +H  CA    T+   D H HP+ L++  P   R       C  C++ + +N 
Sbjct: 105 NCSECQYDVHVGCAFIPETVERED-HEHPLTLLYNTPCKGREDGAKFICDVCEEKMSENL 163

Query: 177 WSYYCRECTYFVHIGCATSWETKKQTEKDQGTE 275
           W YYC+EC Y  H+     +E  +  ++  G E
Sbjct: 164 WVYYCKECDYGTHVHSCAVYEDHESEKRGGGRE 196


>ref|XP_002268034.2| PREDICTED: uncharacterized protein LOC100244183 [Vitis vinifera]
          Length = 309

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
 Frame = +3

Query: 6   CKNCDFWIHRNCAASTTTIYTPDLHHHPVQLIFAIPDVHRSCDRF-CGKCKKLVRKNYWS 182
           C  C + +H  CA+   T+   D H HP+ L +         + F C  C   V    W 
Sbjct: 184 CPTCHYDLHVGCASLPETVIRGD-HQHPLTLFYC--GYKEEGNTFICDVCHGNVPDGCWI 240

Query: 183 YYCRECTYFVHIGCATSWETKKQTEKDQGTE 275
           YYC+ C Y  H+GCAT+ E     E+++GTE
Sbjct: 241 YYCKSCDYGTHLGCATA-EASPVAEEEEGTE 270


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