BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039035
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ...    91   1e-16
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ...    91   1e-16
ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [S...    90   2e-16
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo...    83   2e-14
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g...    83   2e-14

>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 519

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/108 (42%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
 Frame = -2

Query: 341 DRIAWSKSNDGLYSVKTGYQYWRGKCSKNL---GSIPQSGGWKKIWKLLIPHKIKVFLWR 171
           DRI W   NDG YSV++ Y      C + L     + + G W  IW+L +P KIK F+WR
Sbjct: 131 DRIIWKAENDGKYSVRSAYTL----CVEELIDTSFLRRPGYWSDIWRLKVPPKIKNFMWR 186

Query: 170 FCRNNLPVRNRLRSKGVQVTILCPFCNADVEHLLHVFFDCEFANSCWQ 27
            CR  LP RN+LR KGVQ    C  C+   E + H+F  C F    WQ
Sbjct: 187 VCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCTFDVQVWQ 234


>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 612

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/108 (42%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
 Frame = -2

Query: 341 DRIAWSKSNDGLYSVKTGYQYWRGKCSKNL---GSIPQSGGWKKIWKLLIPHKIKVFLWR 171
           DRI W   NDG YSV++ Y      C + L     + + G W  IW+L +P KIK F+WR
Sbjct: 224 DRIIWKAENDGKYSVRSAYTL----CVEELIDTSFLRRPGYWSDIWRLKVPPKIKNFMWR 279

Query: 170 FCRNNLPVRNRLRSKGVQVTILCPFCNADVEHLLHVFFDCEFANSCWQ 27
            CR  LP RN+LR KGVQ    C  C+   E + H+F  C F    WQ
Sbjct: 280 VCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCTFDVQVWQ 327


>ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [Sorghum bicolor]
           gi|241920472|gb|EER93616.1| hypothetical protein
           SORBIDRAFT_01g011130 [Sorghum bicolor]
          Length = 463

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
 Frame = -2

Query: 335 IAWSKSNDGLYSVKTGYQYWRGKCSKNLGSIPQSGG--------WKKIWKLLIPHKIKVF 180
           +AW     G++SVK+ Y+  R    +N  S  Q GG        WK++WKL  P+KIK F
Sbjct: 98  VAWHYDKHGVFSVKSAYKVARDTYIRNHTSQGQQGGSNPGPLSLWKRVWKLSCPNKIKHF 157

Query: 179 LWRFCRNNLPVRNRLRSKGVQVTILCPFCNADVEHLLHVFFDCEFANSCWQHKGI 15
           LWRF  N+ P+R+ L  +G+++   CP CN   E   H+FF C  A   W+  G+
Sbjct: 158 LWRFLHNSHPLRDNLIRRGMEIVPRCPVCNQVGEDGGHLFFKCGMARQVWELLGL 212


>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
          Length = 560

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
 Frame = -2

Query: 341 DRIAWSKSNDGLYSVKTGYQYWR---------GKCSKNLGSIPQSGGWKKIWKLLIPHKI 189
           D +AW     GL+SVK+ Y+  R         G    + GS  +   WKK+WK+ +P K+
Sbjct: 237 DMLAWHYDEKGLFSVKSAYKVQRDGELQRRKRGSAGLSNGSTEREMYWKKVWKMQLPGKV 296

Query: 188 KVFLWRFCRNNLPVRNRLRSKGVQVTILCPFCNADVEHLLHVFFDCEFANSCWQHKGIQ 12
           K F+WRF  N L +R  L+ +G+ +   C  CN   E   H+FF C+     WQ   ++
Sbjct: 297 KHFIWRFSHNILALRVNLQQRGMDLDSRCIICNRMNEDAGHLFFKCKKVKKVWQENNLE 355


>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
            gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
            Japonica Group]
          Length = 1453

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
 Frame = -2

Query: 341  DRIAWSKSNDGLYSVKTGYQYWR---------GKCSKNLGSIPQSGGWKKIWKLLIPHKI 189
            D +AW     GL+SVK+ Y+  R         G    + GS  +   WKK+WK+ +P K+
Sbjct: 1130 DMLAWHYDEKGLFSVKSAYKVQRDGELQRRKRGSAGLSNGSTEREMYWKKVWKMQLPGKV 1189

Query: 188  KVFLWRFCRNNLPVRNRLRSKGVQVTILCPFCNADVEHLLHVFFDCEFANSCWQHKGIQ 12
            K F+WRF  N L +R  L+ +G+ +   C  CN   E   H+FF C+     WQ   ++
Sbjct: 1190 KHFIWRFSHNILALRVNLQQRGMDLDSRCIICNRMNEDAGHLFFKCKKVKKVWQENNLE 1248