BLASTX nr result

ID: Bupleurum21_contig00039030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039030
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_196352.2| TUDOR-SN protein 1 [Arabidopsis thaliana] gi|18...    56   4e-06
ref|XP_003532288.1| PREDICTED: staphylococcal nuclease domain-co...    55   6e-06
ref|NP_001154697.2| TUDOR-SN protein 1 [Arabidopsis thaliana] gi...    55   8e-06
ref|XP_002273150.1| PREDICTED: staphylococcal nuclease domain-co...    55   8e-06
emb|CAN83456.1| hypothetical protein VITISV_034601 [Vitis vinifera]    55   8e-06

>ref|NP_196352.2| TUDOR-SN protein 1 [Arabidopsis thaliana] gi|18086332|gb|AAL57629.1|
            AT5g07350/T2I1_60 [Arabidopsis thaliana]
            gi|332003757|gb|AED91140.1| TUDOR-SN protein 1
            [Arabidopsis thaliana]
          Length = 991

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 8/72 (11%)
 Frame = -3

Query: 344  DISINEVMLEEGLASVKTSR--GPAGSRQKIAGLEKYQKEARKQRLGIW-----DDDDKN 186
            +IS+N  ML+EG+A ++  +  G  G +  +  LEK+Q+EARK R+GIW     + DD++
Sbjct: 920  EISVNAAMLQEGIARMEKRQKWGHKGKQAALDALEKFQEEARKSRIGIWQYGDIESDDED 979

Query: 185  KPPVRK-AGGKK 153
              P RK AGG++
Sbjct: 980  TGPARKPAGGRR 991


>ref|XP_003532288.1| PREDICTED: staphylococcal nuclease domain-containing protein 1-like
            [Glycine max]
          Length = 995

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
 Frame = -3

Query: 344  DISINEVMLEEGLASV-KTSRGPAGSRQK-IAGLEKYQKEARKQRLGIWD------DDDK 189
            DIS+N  ML+EGLA + K +R     RQ+ +  L+ +Q EAR  R G+W       DD+ 
Sbjct: 924  DISVNAAMLQEGLARLEKRNRWDRKERQQALDNLDPFQGEARTNRCGMWQYGDIQSDDED 983

Query: 188  NKPPVRKAGGKK 153
              PP RKAGG+K
Sbjct: 984  TAPPARKAGGRK 995


>ref|NP_001154697.2| TUDOR-SN protein 1 [Arabidopsis thaliana] gi|332003758|gb|AED91141.1|
            TUDOR-SN protein 1 [Arabidopsis thaliana]
          Length = 1007

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
 Frame = -3

Query: 344  DISINEVMLEEGLASVKTSR--GPAGSRQKIAGLEKYQKEARKQRLGIW-----DDDDKN 186
            +IS+N  ML+EG+A ++  +  G  G +  +  LEK+Q+EARK R+GIW     + DD++
Sbjct: 920  EISVNAAMLQEGIARMEKRQKWGHKGKQAALDALEKFQEEARKSRIGIWQYGDIESDDED 979

Query: 185  KPPVRKAGG 159
              P RK  G
Sbjct: 980  TGPARKPAG 988


>ref|XP_002273150.1| PREDICTED: staphylococcal nuclease domain-containing protein 1 [Vitis
            vinifera] gi|296088151|emb|CBI35621.3| unnamed protein
            product [Vitis vinifera]
          Length = 1000

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 8/70 (11%)
 Frame = -3

Query: 338  SINEVMLEEGLASVKTSRGPAGSRQKIA--GLEKYQKEARKQRLGIWD------DDDKNK 183
            SIN  ML+EGLA+V+  +      ++IA   LEK+Q EAR  RL +W       DD+   
Sbjct: 924  SINAAMLKEGLATVEKRKRWDPKEKQIAFDNLEKFQAEARLNRLRMWQYGDIQSDDEDTA 983

Query: 182  PPVRKAGGKK 153
            PPVRKAGG++
Sbjct: 984  PPVRKAGGRR 993


>emb|CAN83456.1| hypothetical protein VITISV_034601 [Vitis vinifera]
          Length = 983

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 8/70 (11%)
 Frame = -3

Query: 338  SINEVMLEEGLASVKTSRGPAGSRQKIA--GLEKYQKEARKQRLGIWD------DDDKNK 183
            SIN  ML+EGLA+V+  +      ++IA   LEK+Q EAR  RL +W       DD+   
Sbjct: 907  SINAAMLKEGLATVEKRKRWDPKEKQIAFDNLEKFQAEARLNRLRMWQYGDIQSDDEDTA 966

Query: 182  PPVRKAGGKK 153
            PPVRKAGG++
Sbjct: 967  PPVRKAGGRR 976


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