BLASTX nr result
ID: Bupleurum21_contig00039029
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00039029
(342 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat... 184 5e-45
ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat... 169 2e-40
ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat... 169 2e-40
ref|XP_002323645.1| predicted protein [Populus trichocarpa] gi|2... 165 3e-39
ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat... 164 9e-39
>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 184 bits (468), Expect = 5e-45
Identities = 85/113 (75%), Positives = 100/113 (88%)
Frame = -2
Query: 341 TLVRVLSACTQLGDVNAGVWVHRYATDIGMEKNVFVATSLVDMYAKCGNMETARTVFDTM 162
T+VRVLSACTQLGD+N+G W+H+ ++GM +NVFV TSLVDMYAKCGNME AR+VFD M
Sbjct: 215 TIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGM 274
Query: 161 PDKDIMSWSAMIQGYASNGLPKEALDLFYVMQKENLKPDCYAMVGVLSACARL 3
P+KDI+SW AMIQGYA NGLPKEA+DLF MQ+EN+KPDCY +VGVLSACARL
Sbjct: 275 PEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARL 327
Score = 105 bits (263), Expect = 3e-21
Identities = 52/109 (47%), Positives = 73/109 (66%)
Frame = -2
Query: 329 VLSACTQLGDVNAGVWVHRYATDIGMEKNVFVATSLVDMYAKCGNMETARTVFDTMPDKD 150
VL AC +L D+ GV +H G + +VFV TSLV +YAKCG +E A VFD +PDK+
Sbjct: 118 VLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKN 177
Query: 149 IMSWSAMIQGYASNGLPKEALDLFYVMQKENLKPDCYAMVGVLSACARL 3
++SW+A+I GY G +EA+D+F + + NL PD + +V VLSAC +L
Sbjct: 178 VVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQL 226
Score = 86.3 bits (212), Expect = 2e-15
Identities = 45/110 (40%), Positives = 63/110 (57%)
Frame = -2
Query: 341 TLVRVLSACTQLGDVNAGVWVHRYATDIGMEKNVFVATSLVDMYAKCGNMETARTVFDTM 162
T+V VLSAC +LG + G WV N + T+L+D+YAKCG+M A VF M
Sbjct: 316 TVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGM 375
Query: 161 PDKDIMSWSAMIQGYASNGLPKEALDLFYVMQKENLKPDCYAMVGVLSAC 12
+KD + W+A+I G A NG K + LF ++K +KPD +G+L C
Sbjct: 376 KEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGC 425
>ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 169 bits (429), Expect = 2e-40
Identities = 77/113 (68%), Positives = 93/113 (82%)
Frame = -2
Query: 341 TLVRVLSACTQLGDVNAGVWVHRYATDIGMEKNVFVATSLVDMYAKCGNMETARTVFDTM 162
+LV+VL+AC +LGD +G W+ RY +D GM +NVFVATSL+DMY KCGN+E A +F M
Sbjct: 217 SLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAM 276
Query: 161 PDKDIMSWSAMIQGYASNGLPKEALDLFYVMQKENLKPDCYAMVGVLSACARL 3
P+KDI+SWS MIQGYA NGLP++ALDLF+ MQ ENLKPDCY MVGVLSACA L
Sbjct: 277 PEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATL 329
Score = 103 bits (256), Expect = 2e-20
Identities = 50/113 (44%), Positives = 74/113 (65%)
Frame = -2
Query: 341 TLVRVLSACTQLGDVNAGVWVHRYATDIGMEKNVFVATSLVDMYAKCGNMETARTVFDTM 162
T+ VL AC + DV G+ +H G + +VFV TSL+ +Y KC N + A VFD +
Sbjct: 116 TIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDI 175
Query: 161 PDKDIMSWSAMIQGYASNGLPKEALDLFYVMQKENLKPDCYAMVGVLSACARL 3
PDK+++SW+A+I GY S+G +EA+ F + + LKPD +++V VL+ACARL
Sbjct: 176 PDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARL 228
Score = 84.7 bits (208), Expect = 7e-15
Identities = 40/110 (36%), Positives = 62/110 (56%)
Frame = -2
Query: 341 TLVRVLSACTQLGDVNAGVWVHRYATDIGMEKNVFVATSLVDMYAKCGNMETARTVFDTM 162
T+V VLSAC LG ++ G+W N + T+L+DMY+KCG++ A +F M
Sbjct: 318 TMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAM 377
Query: 161 PDKDIMSWSAMIQGYASNGLPKEALDLFYVMQKENLKPDCYAMVGVLSAC 12
KD + W+AM+ G + NG K LF +++K ++PD +G+L C
Sbjct: 378 KKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGC 427
>ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 169 bits (429), Expect = 2e-40
Identities = 77/113 (68%), Positives = 93/113 (82%)
Frame = -2
Query: 341 TLVRVLSACTQLGDVNAGVWVHRYATDIGMEKNVFVATSLVDMYAKCGNMETARTVFDTM 162
+LV+VL+AC +LGD +G W+ RY +D GM +NVFVATSL+DMY KCGN+E A +F M
Sbjct: 217 SLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAM 276
Query: 161 PDKDIMSWSAMIQGYASNGLPKEALDLFYVMQKENLKPDCYAMVGVLSACARL 3
P+KDI+SWS MIQGYA NGLP++ALDLF+ MQ ENLKPDCY MVGVLSACA L
Sbjct: 277 PEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATL 329
Score = 103 bits (256), Expect = 2e-20
Identities = 50/113 (44%), Positives = 74/113 (65%)
Frame = -2
Query: 341 TLVRVLSACTQLGDVNAGVWVHRYATDIGMEKNVFVATSLVDMYAKCGNMETARTVFDTM 162
T+ VL AC + DV G+ +H G + +VFV TSL+ +Y KC N + A VFD +
Sbjct: 116 TIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDI 175
Query: 161 PDKDIMSWSAMIQGYASNGLPKEALDLFYVMQKENLKPDCYAMVGVLSACARL 3
PDK+++SW+A+I GY S+G +EA+ F + + LKPD +++V VL+ACARL
Sbjct: 176 PDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARL 228
Score = 84.3 bits (207), Expect = 9e-15
Identities = 40/110 (36%), Positives = 62/110 (56%)
Frame = -2
Query: 341 TLVRVLSACTQLGDVNAGVWVHRYATDIGMEKNVFVATSLVDMYAKCGNMETARTVFDTM 162
T+V VLSAC LG ++ G+W N + T+L+DMY+KCG++ A +F M
Sbjct: 318 TMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAM 377
Query: 161 PDKDIMSWSAMIQGYASNGLPKEALDLFYVMQKENLKPDCYAMVGVLSAC 12
KD + W+AM+ G + NG K LF +++K ++PD +G+L C
Sbjct: 378 KRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGC 427
>ref|XP_002323645.1| predicted protein [Populus trichocarpa] gi|222868275|gb|EEF05406.1|
predicted protein [Populus trichocarpa]
Length = 682
Score = 165 bits (418), Expect = 3e-39
Identities = 78/113 (69%), Positives = 93/113 (82%)
Frame = -2
Query: 341 TLVRVLSACTQLGDVNAGVWVHRYATDIGMEKNVFVATSLVDMYAKCGNMETARTVFDTM 162
+LV VLSAC + GD+ +G W+ Y T+ GM +NVFVAT+LVD Y KCGNME AR+VFD M
Sbjct: 211 SLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGM 270
Query: 161 PDKDIMSWSAMIQGYASNGLPKEALDLFYVMQKENLKPDCYAMVGVLSACARL 3
+K+I+SWS+MIQGYASNGLPKEALDLF+ M E LKPDCYAMVGVL +CARL
Sbjct: 271 LEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARL 323
Score = 95.9 bits (237), Expect = 3e-18
Identities = 46/108 (42%), Positives = 67/108 (62%)
Frame = -2
Query: 329 VLSACTQLGDVNAGVWVHRYATDIGMEKNVFVATSLVDMYAKCGNMETARTVFDTMPDKD 150
VL AC ++ D GV +H G E + FV SL+++Y KCG ++ A VFD +PDK+
Sbjct: 114 VLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKN 173
Query: 149 IMSWSAMIQGYASNGLPKEALDLFYVMQKENLKPDCYAMVGVLSACAR 6
SW+A I GY G +EA+D+F + + L+PD +++V VLSAC R
Sbjct: 174 FASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKR 221
Score = 86.7 bits (213), Expect = 2e-15
Identities = 46/109 (42%), Positives = 61/109 (55%)
Frame = -2
Query: 338 LVRVLSACTQLGDVNAGVWVHRYATDIGMEKNVFVATSLVDMYAKCGNMETARTVFDTMP 159
+V VL +C +LG + G W N + T+L+DMYAKCG M+ A VF M
Sbjct: 313 MVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMR 372
Query: 158 DKDIMSWSAMIQGYASNGLPKEALDLFYVMQKENLKPDCYAMVGVLSAC 12
KD + W+A I G A +G K+AL LF M+K +KPD VG+L AC
Sbjct: 373 KKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCAC 421
>ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 164 bits (414), Expect = 9e-39
Identities = 75/113 (66%), Positives = 95/113 (84%)
Frame = -2
Query: 341 TLVRVLSACTQLGDVNAGVWVHRYATDIGMEKNVFVATSLVDMYAKCGNMETARTVFDTM 162
TLVR+L AC+++GD+ +G W+ Y + G NVFVATSLVDMYAKCG+ME AR VFD M
Sbjct: 205 TLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGM 264
Query: 161 PDKDIMSWSAMIQGYASNGLPKEALDLFYVMQKENLKPDCYAMVGVLSACARL 3
+KD++ WSA+IQGYASNG+PKEALD+F+ MQ+EN++PDCYAMVGV SAC+RL
Sbjct: 265 VEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRL 317
Score = 85.9 bits (211), Expect = 3e-15
Identities = 45/110 (40%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Frame = -2
Query: 329 VLSACTQLGDV-NAGVWVHRYATDIGMEKNVFVATSLVDMYAKCGNMETARTVFDTMPDK 153
VL ACT+L + G+ +H G + +VFV T LV +Y+K G + AR VFD +P+K
Sbjct: 107 VLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEK 166
Query: 152 DIMSWSAMIQGYASNGLPKEALDLFYVMQKENLKPDCYAMVGVLSACARL 3
+++SW+A+I GY +G EAL LF + + L+PD + +V +L AC+R+
Sbjct: 167 NVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRV 216
Score = 70.1 bits (170), Expect = 2e-10
Identities = 39/109 (35%), Positives = 57/109 (52%)
Frame = -2
Query: 338 LVRVLSACTQLGDVNAGVWVHRYATDIGMEKNVFVATSLVDMYAKCGNMETARTVFDTMP 159
+V V SAC++LG + G W N + T+L+D YAKCG++ A+ VF M
Sbjct: 307 MVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMR 366
Query: 158 DKDIMSWSAMIQGYASNGLPKEALDLFYVMQKENLKPDCYAMVGVLSAC 12
KD + ++A+I G A G A +F M K ++PD VG+L C
Sbjct: 367 RKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGC 415