BLASTX nr result

ID: Bupleurum21_contig00039024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00039024
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    66   3e-09
ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...    65   6e-09
ref|XP_003636511.1| hypothetical protein MTR_043s0014 [Medicago ...    63   3e-08
ref|XP_003604713.1| hypothetical protein MTR_4g016830 [Medicago ...    62   6e-08
ref|XP_002512628.1| conserved hypothetical protein [Ricinus comm...    61   8e-08

>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/81 (40%), Positives = 48/81 (59%)
 Frame = -2

Query: 291 EAETNALYEGLCWLQTLPYHSVLIESDSLLTVQAIQRSDANRLEIGHLLDNCRRILQCRL 112
           EAE   L + + WL  L   +V +E D  L V +I   + N+ E G ++D+CR +LQ   
Sbjct: 109 EAEAVGLRDAILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQFT 168

Query: 111 DYSISFVKRQANKAAHEMARI 49
           ++ ISFV+RQAN  AH  AR+
Sbjct: 169 NFKISFVRRQANVVAHSFARV 189


>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/94 (35%), Positives = 55/94 (58%)
 Frame = -2

Query: 288 AETNALYEGLCWLQTLPYHSVLIESDSLLTVQAIQRSDANRLEIGHLLDNCRRILQCRLD 109
           AE   L E + W+ +L   +V+ E D+ + V A+    A+  E G ++ +CR +LQ   +
Sbjct: 221 AEAIGLREAVQWVLSLGRSNVIFEYDAKVVVDAVLSGAADLFEFGAVIADCRLLLQHGCN 280

Query: 108 YSISFVKRQANKAAHEMARIPCLPNCQNIFTSPP 7
           YS+ F+++QAN  AH +AR   L +  N+F+ PP
Sbjct: 281 YSVQFIRKQANLVAHSLARASHLQDGFNMFSVPP 314


>ref|XP_003636511.1| hypothetical protein MTR_043s0014 [Medicago truncatula]
           gi|355502446|gb|AES83649.1| hypothetical protein
           MTR_043s0014 [Medicago truncatula]
          Length = 132

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/95 (35%), Positives = 51/95 (53%)
 Frame = -2

Query: 291 EAETNALYEGLCWLQTLPYHSVLIESDSLLTVQAIQRSDANRLEIGHLLDNCRRILQCRL 112
           EAE   L + + WL  L    V IE D  L V +I  +  N+ + G+++ +CR +L    
Sbjct: 26  EAEALGLKDTIVWLGELGLSMVQIELDCKLVVDSIMENSNNQSDFGNIISSCRSLLNQFR 85

Query: 111 DYSISFVKRQANKAAHEMARIPCLPNCQNIFTSPP 7
           ++ ISFV+RQAN  AH + R   L  C +I+   P
Sbjct: 86  NFKISFVRRQANYVAHTLTRALKLDACHHIYDLIP 120


>ref|XP_003604713.1| hypothetical protein MTR_4g016830 [Medicago truncatula]
           gi|355505768|gb|AES86910.1| hypothetical protein
           MTR_4g016830 [Medicago truncatula]
          Length = 108

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/95 (32%), Positives = 52/95 (54%)
 Frame = -2

Query: 291 EAETNALYEGLCWLQTLPYHSVLIESDSLLTVQAIQRSDANRLEIGHLLDNCRRILQCRL 112
           EAE  AL E +    +L + +V  E+D +    AI  + A+  E+G ++  CR +L    
Sbjct: 5   EAEATALSEAIKLAISLGFQTVRFETDCMTLADAIHTTSAHLNEVGDIISQCRGLLFTNT 64

Query: 111 DYSISFVKRQANKAAHEMARIPCLPNCQNIFTSPP 7
           D+ +S+++RQAN+ AH +AR        ++F S P
Sbjct: 65  DFKVSYIRRQANRVAHSIARASLSHLSPHLFYSVP 99


>ref|XP_002512628.1| conserved hypothetical protein [Ricinus communis]
           gi|223548589|gb|EEF50080.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 223

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/78 (41%), Positives = 46/78 (58%)
 Frame = -2

Query: 288 AETNALYEGLCWLQTLPYHSVLIESDSLLTVQAIQRSDANRLEIGHLLDNCRRILQCRLD 109
           AE  AL E + W   + +  V+ ESDS + V AI+   A+  E G ++D CR +L   L+
Sbjct: 115 AEAVALKEAIRWAIQMRFSLVVFESDSKIAVDAIRSLAADWSEFGIIIDECRSLLSLGLN 174

Query: 108 YSISFVKRQANKAAHEMA 55
           + + FVKRQAN  AH +A
Sbjct: 175 FQVYFVKRQANMVAHVLA 192


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