BLASTX nr result

ID: Bupleurum21_contig00038975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038975
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169420.1| PREDICTED: glutamate receptor 2.2-like [Cucu...    86   3e-15
ref|XP_004146350.1| PREDICTED: glutamate receptor 2.7-like [Cucu...    86   3e-15
emb|CBI17828.3| unnamed protein product [Vitis vinifera]               84   9e-15
ref|XP_002515378.1| glutamate receptor 2 plant, putative [Ricinu...    84   9e-15
ref|XP_002324368.1| glutamate-gated kainate-type ion channel rec...    84   9e-15

>ref|XP_004169420.1| PREDICTED: glutamate receptor 2.2-like [Cucumis sativus]
          Length = 829

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/90 (50%), Positives = 58/90 (64%)
 Frame = +1

Query: 1   STDKPKGWDVPGMGLKLRVGVPKKTGFTEFVNVTEIGHTKTCNVTGFSIDVFKAALESLS 180
           S   P+GW VP  G K R+GVPKK GF EF++VT    T   N TGF IDVF+A  ++L 
Sbjct: 358 SITAPRGWAVPADGEKFRIGVPKKQGFNEFLDVTRNPQTGELNFTGFCIDVFRAVADAL- 416

Query: 181 SSFRLDPEFFAFVNDSGDSNGTYDDLVNQL 270
             F L  EF  F +D+GD++  YDDL++QL
Sbjct: 417 -PFPLPYEFELFKDDAGDNSVIYDDLLHQL 445


>ref|XP_004146350.1| PREDICTED: glutamate receptor 2.7-like [Cucumis sativus]
          Length = 859

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/90 (50%), Positives = 58/90 (64%)
 Frame = +1

Query: 1   STDKPKGWDVPGMGLKLRVGVPKKTGFTEFVNVTEIGHTKTCNVTGFSIDVFKAALESLS 180
           S   P+GW VP  G K R+GVPKK GF EF++VT    T   N TGF IDVF+A  ++L 
Sbjct: 384 SITAPRGWAVPADGEKFRIGVPKKQGFNEFLDVTRNPQTGELNFTGFCIDVFRAVADAL- 442

Query: 181 SSFRLDPEFFAFVNDSGDSNGTYDDLVNQL 270
             F L  EF  F +D+GD++  YDDL++QL
Sbjct: 443 -PFPLPYEFELFKDDAGDNSVIYDDLLHQL 471


>emb|CBI17828.3| unnamed protein product [Vitis vinifera]
          Length = 884

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 45/86 (52%), Positives = 57/86 (66%)
 Frame = +1

Query: 13  PKGWDVPGMGLKLRVGVPKKTGFTEFVNVTEIGHTKTCNVTGFSIDVFKAALESLSSSFR 192
           PKGW +P  G KLR+GVP K GFTE V V     T + +V+GF IDVFKAA+E+L   + 
Sbjct: 427 PKGWTMPVSGKKLRIGVPVKGGFTELVKVDRNLQTGSVSVSGFCIDVFKAAVENL--PYA 484

Query: 193 LDPEFFAFVNDSGDSNGTYDDLVNQL 270
           L  EF  F + +G S GTY+DLV Q+
Sbjct: 485 LTYEFIPFADSNGSSAGTYNDLVFQV 510


>ref|XP_002515378.1| glutamate receptor 2 plant, putative [Ricinus communis]
           gi|223545322|gb|EEF46827.1| glutamate receptor 2 plant,
           putative [Ricinus communis]
          Length = 931

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 45/94 (47%), Positives = 57/94 (60%)
 Frame = +1

Query: 1   STDKPKGWDVPGMGLKLRVGVPKKTGFTEFVNVTEIGHTKTCNVTGFSIDVFKAALESLS 180
           S+  PKGW++P  G KLR+ VP K GF EFV VT    T T  V G+ IDVF A +++L 
Sbjct: 422 SSSVPKGWEIPTKGKKLRILVPVKEGFNEFVKVTRDPSTNTTTVRGYCIDVFDAVVKAL- 480

Query: 181 SSFRLDPEFFAFVNDSGDSNGTYDDLVNQLKVPE 282
             + +  E+  FVN  G S GTYDDLV Q+   E
Sbjct: 481 -PYAVTYEYTPFVNPDGSSAGTYDDLVYQVYTGE 513


>ref|XP_002324368.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865802|gb|EEF02933.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 885

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/90 (45%), Positives = 59/90 (65%)
 Frame = +1

Query: 1   STDKPKGWDVPGMGLKLRVGVPKKTGFTEFVNVTEIGHTKTCNVTGFSIDVFKAALESLS 180
           +T  PKGW++P  G KLR+GVP K GF+EFV VT    + T  VTG+SIDVF + +++L 
Sbjct: 418 TTSVPKGWEIPTNGKKLRIGVPVKDGFSEFVKVTRDPSSNTKTVTGYSIDVFDSVVKAL- 476

Query: 181 SSFRLDPEFFAFVNDSGDSNGTYDDLVNQL 270
             + L  E+  F    G++ GTY+DL+ Q+
Sbjct: 477 -PYALPYEYIPFAKPDGETAGTYNDLIYQV 505


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