BLASTX nr result

ID: Bupleurum21_contig00038759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038759
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002870202.1| binding protein [Arabidopsis lyrata subsp. l...   212   3e-53
ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|2...   211   4e-53
emb|CBI26044.3| unnamed protein product [Vitis vinifera]              211   6e-53
ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-li...   211   6e-53
emb|CAA72043.1| hypothetical protein [Arabidopsis thaliana]           209   2e-52

>ref|XP_002870202.1| binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297316038|gb|EFH46461.1| binding protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1315

 Score =  212 bits (539), Expect = 3e-53
 Identities = 116/153 (75%), Positives = 126/153 (82%), Gaps = 4/153 (2%)
 Frame = -3

Query: 448  ISKITNCLRDPCEVVRRQTFILLSRLLQRDYVKRRGVIFLRFLLTLVDESEKIRHLADFL 269
            I KITN LRDPCEVVRRQTFILLSRLLQRDYVK RGV+FLRFLL+LVDESEKIR LADFL
Sbjct: 922  IPKITNRLRDPCEVVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADFL 981

Query: 268  FANVLKAKAPLLAYNSFVETIYVLNG--VHTVHXXXXXXXXXXRK--FSICGNDERSRSD 101
            F ++LK KAPLLAYNSFVE IYVLN    HT H          ++  FSI GNDER+RS 
Sbjct: 982  FGSILKVKAPLLAYNSFVEAIYVLNDCHAHTGHSNPDSKQSRTKEQAFSIRGNDERARSK 1041

Query: 100  RMRIYTTLLKQMAPEHLLATFAKVCAEILASAS 2
            RM+IY TLLKQMAPEHLLATFAK+CAEILA+AS
Sbjct: 1042 RMQIYITLLKQMAPEHLLATFAKLCAEILAAAS 1074


>ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|222864559|gb|EEF01690.1|
            predicted protein [Populus trichocarpa]
          Length = 1272

 Score =  211 bits (538), Expect = 4e-53
 Identities = 112/151 (74%), Positives = 121/151 (80%), Gaps = 2/151 (1%)
 Frame = -3

Query: 448  ISKITNCLRDPCEVVRRQTFILLSRLLQRDYVKRRGVIFLRFLLTLVDESEKIRHLADFL 269
            ISKIT CLRDPCE+VRRQTFILLSRLLQRDYVK RGV+FLRFLL+LVDESE IR LADFL
Sbjct: 871  ISKITKCLRDPCELVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESETIRQLADFL 930

Query: 268  FANVLKAKAPLLAYNSFVETIYVLN--GVHTVHXXXXXXXXXXRKFSICGNDERSRSDRM 95
            F N+LK KAPLLAYNSFVE I+VLN    H  H            FSI GNDE SR+ RM
Sbjct: 931  FGNILKVKAPLLAYNSFVEAIFVLNDCDAHNGHCGSKSSQTESHLFSIRGNDENSRTKRM 990

Query: 94   RIYTTLLKQMAPEHLLATFAKVCAEILASAS 2
             IY +LLKQMAPEHLLATFAK+CAEILA+AS
Sbjct: 991  HIYVSLLKQMAPEHLLATFAKLCAEILAAAS 1021


>emb|CBI26044.3| unnamed protein product [Vitis vinifera]
          Length = 1294

 Score =  211 bits (536), Expect = 6e-53
 Identities = 112/151 (74%), Positives = 123/151 (81%), Gaps = 2/151 (1%)
 Frame = -3

Query: 448  ISKITNCLRDPCEVVRRQTFILLSRLLQRDYVKRRGVIFLRFLLTLVDESEKIRHLADFL 269
            +SKIT CLRD CE+VRRQTFILLSRLLQRDYVK RGV+FLRFLL+LVDESE+IR LADFL
Sbjct: 911  VSKITKCLRDSCELVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEEIRRLADFL 970

Query: 268  FANVLKAKAPLLAYNSFVETIYVLNG--VHTVHXXXXXXXXXXRKFSICGNDERSRSDRM 95
            F N+LKAKAPLLAYNSFVE I+VLN   VH              +FSI GNDE+SRS RM
Sbjct: 971  FGNILKAKAPLLAYNSFVEAIFVLNDCHVHNGGNDSQSTQTERDRFSIRGNDEKSRSKRM 1030

Query: 94   RIYTTLLKQMAPEHLLATFAKVCAEILASAS 2
             IY  LLKQMAPEHLLATFAK+CAEILA+AS
Sbjct: 1031 HIYVCLLKQMAPEHLLATFAKLCAEILAAAS 1061


>ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-like [Vitis vinifera]
          Length = 1345

 Score =  211 bits (536), Expect = 6e-53
 Identities = 112/151 (74%), Positives = 123/151 (81%), Gaps = 2/151 (1%)
 Frame = -3

Query: 448  ISKITNCLRDPCEVVRRQTFILLSRLLQRDYVKRRGVIFLRFLLTLVDESEKIRHLADFL 269
            +SKIT CLRD CE+VRRQTFILLSRLLQRDYVK RGV+FLRFLL+LVDESE+IR LADFL
Sbjct: 952  VSKITKCLRDSCELVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEEIRRLADFL 1011

Query: 268  FANVLKAKAPLLAYNSFVETIYVLNG--VHTVHXXXXXXXXXXRKFSICGNDERSRSDRM 95
            F N+LKAKAPLLAYNSFVE I+VLN   VH              +FSI GNDE+SRS RM
Sbjct: 1012 FGNILKAKAPLLAYNSFVEAIFVLNDCHVHNGGNDSQSTQTERDRFSIRGNDEKSRSKRM 1071

Query: 94   RIYTTLLKQMAPEHLLATFAKVCAEILASAS 2
             IY  LLKQMAPEHLLATFAK+CAEILA+AS
Sbjct: 1072 HIYVCLLKQMAPEHLLATFAKLCAEILAAAS 1102


>emb|CAA72043.1| hypothetical protein [Arabidopsis thaliana]
          Length = 672

 Score =  209 bits (532), Expect = 2e-52
 Identities = 115/153 (75%), Positives = 124/153 (81%), Gaps = 4/153 (2%)
 Frame = -3

Query: 448 ISKITNCLRDPCEVVRRQTFILLSRLLQRDYVKRRGVIFLRFLLTLVDESEKIRHLADFL 269
           I KIT  LRDPCEVVRRQTFILLSRLLQRDYVK RGV+FLRFLL+LVDESEKIR LADFL
Sbjct: 296 IPKITKRLRDPCEVVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRRLADFL 355

Query: 268 FANVLKAKAPLLAYNSFVETIYVLNG--VHTVHXXXXXXXXXXRK--FSICGNDERSRSD 101
           F ++LK KAPLLAYNSFVE IYVLN    HT H          +   FSI GNDER+RS 
Sbjct: 356 FGSILKVKAPLLAYNSFVEAIYVLNDCHAHTGHSNPDSKQSRTKDQVFSIRGNDERARSK 415

Query: 100 RMRIYTTLLKQMAPEHLLATFAKVCAEILASAS 2
           RM+IY TLLKQMAPEHLLATFAK+CAEILA+AS
Sbjct: 416 RMQIYVTLLKQMAPEHLLATFAKLCAEILAAAS 448


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