BLASTX nr result

ID: Bupleurum21_contig00038108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038108
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284328.2| PREDICTED: LOW QUALITY PROTEIN: auxin respon...   149   2e-34
emb|CAN80533.1| hypothetical protein VITISV_030510 [Vitis vinifera]   149   2e-34
ref|XP_002307410.1| predicted protein [Populus trichocarpa] gi|2...   137   7e-31
ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793...   137   9e-31
ref|XP_003543780.1| PREDICTED: auxin response factor 17-like [Gl...   136   2e-30

>ref|XP_002284328.2| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 17-like
           [Vitis vinifera]
          Length = 593

 Score =  149 bits (377), Expect = 2e-34
 Identities = 80/132 (60%), Positives = 96/132 (72%), Gaps = 5/132 (3%)
 Frame = -2

Query: 383 GTSVQIPAIGSRVYYFPQGHAEQSYSTPSFSPLVHSHPFTVCRVVNVCFSANSETDEVFV 204
           G SV IPA+ SRVYYFPQGH EQ+ S P  SPLV S P  +CRVV V F A+ +TDEVF 
Sbjct: 22  GKSVHIPAVHSRVYYFPQGHVEQASSPPVLSPLVFSKPSVLCRVVAVWFLADQDTDEVFA 81

Query: 203 KMRLAPI--TTDNGN-QGKVIHNEQGDVEDENE--VVSFSKILTPSDANNGGGFSVPRFC 39
           K+RL P+  + ++G  + + + +   D EDE E  V+SF KILT SDANNGGGFSVPRFC
Sbjct: 82  KIRLEPVGRSWESGTMERRRVGDGDDDKEDEGEDKVMSFVKILTSSDANNGGGFSVPRFC 141

Query: 38  ADSIFPPLNFEA 3
           AD IFPPLNF+A
Sbjct: 142 ADYIFPPLNFQA 153


>emb|CAN80533.1| hypothetical protein VITISV_030510 [Vitis vinifera]
          Length = 624

 Score =  149 bits (377), Expect = 2e-34
 Identities = 80/132 (60%), Positives = 96/132 (72%), Gaps = 5/132 (3%)
 Frame = -2

Query: 383 GTSVQIPAIGSRVYYFPQGHAEQSYSTPSFSPLVHSHPFTVCRVVNVCFSANSETDEVFV 204
           G SV IPA+ SRVYYFPQGH EQ+ S P  SPLV S P  +CRVV V F A+ +TDEVF 
Sbjct: 22  GKSVHIPAVHSRVYYFPQGHVEQASSPPVLSPLVFSKPSVLCRVVAVWFLADQDTDEVFA 81

Query: 203 KMRLAPI--TTDNGN-QGKVIHNEQGDVEDENE--VVSFSKILTPSDANNGGGFSVPRFC 39
           K+RL P+  + ++G  + + + +   D EDE E  V+SF KILT SDANNGGGFSVPRFC
Sbjct: 82  KIRLEPVGRSWESGTMERRRVGDGDDDKEDEGEDKVMSFVKILTSSDANNGGGFSVPRFC 141

Query: 38  ADSIFPPLNFEA 3
           AD IFPPLNF+A
Sbjct: 142 ADYIFPPLNFQA 153


>ref|XP_002307410.1| predicted protein [Populus trichocarpa] gi|222856859|gb|EEE94406.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  137 bits (346), Expect = 7e-31
 Identities = 75/140 (53%), Positives = 95/140 (67%), Gaps = 13/140 (9%)
 Frame = -2

Query: 383 GTSVQIPAIGSRVYYFPQGHAEQSYST-----PSFSPLVHSHPFTVCRVVNVCFSANSET 219
           G+SVQIP I SRVYYFPQGH EQS S+     P  S L  S P   C++  V F A+  T
Sbjct: 7   GSSVQIPTINSRVYYFPQGHLEQSSSSTAPHPPFLSNLALSKPLISCQISAVDFLADPVT 66

Query: 218 DEVFVKMRLAPITTDNGNQG----KVIHNEQGDV----EDENEVVSFSKILTPSDANNGG 63
           DEVF+++ L P+   + N      +   +E G V    +DEN++++F+KILTPSDANNGG
Sbjct: 67  DEVFIRLLLLPLNNHSCNLPLSFLEPSRSEGGGVNDVDDDENKILAFAKILTPSDANNGG 126

Query: 62  GFSVPRFCADSIFPPLNFEA 3
           GFSVPRFCADSIFPPLN++A
Sbjct: 127 GFSVPRFCADSIFPPLNYQA 146


>ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793208 [Glycine max]
          Length = 1160

 Score =  137 bits (345), Expect = 9e-31
 Identities = 73/131 (55%), Positives = 89/131 (67%), Gaps = 4/131 (3%)
 Frame = -2

Query: 383 GTSVQIPAIGSRVYYFPQGHAEQSYSTP-SFSPLVHSHPFTVCRVVNVCFSANSETDEVF 207
           GT+V+IP + SRVYYFPQGH +Q+ S P + SPL+ S P  +CRV +V F A+  TDEVF
Sbjct: 26  GTTVEIPTLHSRVYYFPQGHFDQASSAPRNLSPLLLSKPAVLCRVESVQFLADPLTDEVF 85

Query: 206 VKMRLAPITTDNGNQGKVIHNEQGDVE---DENEVVSFSKILTPSDANNGGGFSVPRFCA 36
            K+ L P+     +    +            EN VVSFSK+LT SDANNGGGFSVPRFCA
Sbjct: 86  AKLILHPVADCFASGPSAVAPAAASASAQTGENNVVSFSKVLTASDANNGGGFSVPRFCA 145

Query: 35  DSIFPPLNFEA 3
           DSIFPPLNF+A
Sbjct: 146 DSIFPPLNFQA 156


>ref|XP_003543780.1| PREDICTED: auxin response factor 17-like [Glycine max]
          Length = 551

 Score =  136 bits (343), Expect = 2e-30
 Identities = 72/132 (54%), Positives = 87/132 (65%), Gaps = 5/132 (3%)
 Frame = -2

Query: 383 GTSVQIPAIGSRVYYFPQGHAEQSYSTPSFSPLVHSHPFTVCRVVNVCFSANSETDEVFV 204
           G +VQIP + SRVYYFPQGH E +  +   SPL+ S PF  C V ++ F A+  +DEVF 
Sbjct: 19  GAAVQIPKLHSRVYYFPQGHMEHASPSHYLSPLIRSLPFVPCHVSSLDFLADPFSDEVFA 78

Query: 203 KMRLAPITTDNG----NQGKVIHNEQGDVEDENE-VVSFSKILTPSDANNGGGFSVPRFC 39
           K  L P++        N  K   N+  D + EN  VVSF+KILTPSDANNGGGFSVPRFC
Sbjct: 79  KFLLTPLSQSQQQPFQNDTKEARNDDDDEDRENNGVVSFAKILTPSDANNGGGFSVPRFC 138

Query: 38  ADSIFPPLNFEA 3
           ADS FPPL+F A
Sbjct: 139 ADSCFPPLDFRA 150


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