BLASTX nr result

ID: Bupleurum21_contig00038014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038014
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB53034.1| photosystem I subunit XI precursor [Arabidopsis ...    92   3e-17
gb|ACG24344.1| photosystem I reaction center subunit XI [Zea mays]     92   3e-17
ref|NP_193016.1| photosystem I reaction center subunit XI [Arabi...    92   3e-17
dbj|BAA84771.1| photosystem I subunit PSI-L [Arabidopsis thaliana]     92   3e-17
ref|XP_002863290.1| predicted protein [Arabidopsis lyrata subsp....    90   2e-16

>emb|CAB53034.1| photosystem I subunit XI precursor [Arabidopsis thaliana]
          Length = 219

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/54 (81%), Positives = 45/54 (83%)
 Frame = +3

Query: 3   APALTLTGRKKQPDQLQTADGWAKXXXXXXXXXISGVTWAYFLLYVLDLPYFVK 164
           AP+LTLTGRKKQPDQLQTADGWAK         ISGVTWAYFLLYVLDLPYFVK
Sbjct: 166 APSLTLTGRKKQPDQLQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219


>gb|ACG24344.1| photosystem I reaction center subunit XI [Zea mays]
          Length = 219

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/54 (81%), Positives = 45/54 (83%)
 Frame = +3

Query: 3   APALTLTGRKKQPDQLQTADGWAKXXXXXXXXXISGVTWAYFLLYVLDLPYFVK 164
           AP+LTLTGRKKQPDQLQTADGWAK         ISGVTWAYFLLYVLDLPYFVK
Sbjct: 166 APSLTLTGRKKQPDQLQTADGWAKFTRGFFFGGISGVTWAYFLLYVLDLPYFVK 219


>ref|NP_193016.1| photosystem I reaction center subunit XI [Arabidopsis thaliana]
           gi|18203449|sp|Q9SUI4.2|PSAL_ARATH RecName:
           Full=Photosystem I reaction center subunit XI,
           chloroplastic; Short=PSI-L; AltName: Full=PSI subunit V;
           Flags: Precursor gi|16226622|gb|AAL16216.1|AF428447_1
           AT4g12800/T20K18_150 [Arabidopsis thaliana]
           gi|17933283|gb|AAL48225.1|AF446350_1
           AT4g12800/T20K18_150 [Arabidopsis thaliana]
           gi|4586256|emb|CAB40997.1| probable photosystem I chain
           XI precursor [Arabidopsis thaliana]
           gi|7267981|emb|CAB78322.1| probable photosystem I chain
           XI precursor [Arabidopsis thaliana]
           gi|16649159|gb|AAL24431.1| probable photosystem I chain
           XI precursor [Arabidopsis thaliana]
           gi|20453409|gb|AAM19943.1| AT4g12800/T20K18_150
           [Arabidopsis thaliana] gi|21592939|gb|AAM64889.1|
           probable photosystem I chain XI precursor [Arabidopsis
           thaliana] gi|332657786|gb|AEE83186.1| photosystem I
           reaction center subunit XI [Arabidopsis thaliana]
          Length = 219

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/54 (81%), Positives = 45/54 (83%)
 Frame = +3

Query: 3   APALTLTGRKKQPDQLQTADGWAKXXXXXXXXXISGVTWAYFLLYVLDLPYFVK 164
           AP+LTLTGRKKQPDQLQTADGWAK         ISGVTWAYFLLYVLDLPYFVK
Sbjct: 166 APSLTLTGRKKQPDQLQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219


>dbj|BAA84771.1| photosystem I subunit PSI-L [Arabidopsis thaliana]
          Length = 124

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/54 (81%), Positives = 45/54 (83%)
 Frame = +3

Query: 3   APALTLTGRKKQPDQLQTADGWAKXXXXXXXXXISGVTWAYFLLYVLDLPYFVK 164
           AP+LTLTGRKKQPDQLQTADGWAK         ISGVTWAYFLLYVLDLPYFVK
Sbjct: 71  APSLTLTGRKKQPDQLQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 124


>ref|XP_002863290.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309124|gb|EFH39549.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 42/54 (77%), Positives = 45/54 (83%)
 Frame = +3

Query: 3   APALTLTGRKKQPDQLQTADGWAKXXXXXXXXXISGVTWAYFLLYVLDLPYFVK 164
           AP+LTLTGRKKQPDQLQTA+GWAK         ISGVTWAYFLLYVLDLPY+VK
Sbjct: 166 APSLTLTGRKKQPDQLQTAEGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYYVK 219


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