BLASTX nr result

ID: Bupleurum21_contig00037493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037493
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    62   2e-11
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    62   3e-11
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...    62   3e-11
ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-10
ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-09

>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 62.0 bits (149), Expect(2) = 2e-11
 Identities = 26/62 (41%), Positives = 40/62 (64%)
 Frame = -3

Query: 574 QIPVWVKFSNVPHSYWCMEGLSYLASALGTPVSLDKPTSALEPLKFARICINLSASSARP 395
           ++PVWV+  NVP  YW ++GLS +ASA+G P+  D  T   + L +AR+C+ + AS    
Sbjct: 239 RVPVWVRLYNVPLEYWTIKGLSCVASAIGVPLHADHTTLLRKRLSYARVCVEIDASKTLV 298

Query: 394 KQ 389
           K+
Sbjct: 299 KE 300



 Score = 31.6 bits (70), Expect(2) = 2e-11
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -2

Query: 347 VYVKVEVDYPIMPPSCSLCKCFGHPIFKCPNNDL 246
           +++ +  +Y  +P  CS C  FGH    C  N++
Sbjct: 309 LFITISAEYEWIPSKCSNCNVFGHTTALCATNNI 342


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 61.6 bits (148), Expect(2) = 3e-11
 Identities = 26/62 (41%), Positives = 40/62 (64%)
 Frame = -3

Query: 574 QIPVWVKFSNVPHSYWCMEGLSYLASALGTPVSLDKPTSALEPLKFARICINLSASSARP 395
           ++PVWV+  NVP  YW ++GLS +ASA+G P+  D  T   + L +AR+C+ + AS    
Sbjct: 239 RVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTLV 298

Query: 394 KQ 389
           K+
Sbjct: 299 KE 300



 Score = 31.6 bits (70), Expect(2) = 3e-11
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -2

Query: 347 VYVKVEVDYPIMPPSCSLCKCFGHPIFKCPNNDL 246
           +++ +  +Y  +P  CS C  FGH    C  N++
Sbjct: 309 LFITISAEYEWIPSKCSNCNVFGHTTALCATNNI 342


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 61.6 bits (148), Expect(2) = 3e-11
 Identities = 26/62 (41%), Positives = 40/62 (64%)
 Frame = -3

Query: 574 QIPVWVKFSNVPHSYWCMEGLSYLASALGTPVSLDKPTSALEPLKFARICINLSASSARP 395
           ++PVWV+  NVP  YW ++GLS +ASA+G P+  D  T   + L +AR+C+ + AS    
Sbjct: 239 RVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTLV 298

Query: 394 KQ 389
           K+
Sbjct: 299 KE 300



 Score = 61.6 bits (148), Expect(2) = 3e-11
 Identities = 26/62 (41%), Positives = 40/62 (64%)
 Frame = -3

Query: 574  QIPVWVKFSNVPHSYWCMEGLSYLASALGTPVSLDKPTSALEPLKFARICINLSASSARP 395
            ++PVWV+  NVP  YW ++GLS +ASA+G P+  D  T   + L +AR+C+ + AS    
Sbjct: 1032 RVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTLV 1091

Query: 394  KQ 389
            K+
Sbjct: 1092 KE 1093



 Score = 31.6 bits (70), Expect(2) = 3e-11
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -2

Query: 347 VYVKVEVDYPIMPPSCSLCKCFGHPIFKCPNNDL 246
           +++ +  +Y  +P  CS C  FGH    C  N++
Sbjct: 309 LFITISAEYEWIPSKCSNCNVFGHTTALCATNNI 342



 Score = 31.6 bits (70), Expect(2) = 3e-11
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -2

Query: 347  VYVKVEVDYPIMPPSCSLCKCFGHPIFKCPNNDL 246
            +++ +  +Y  +P  CS C  FGH    C  N++
Sbjct: 1102 LFITISAEYEWIPSKCSNCNVFGHTTALCATNNI 1135


>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score = 60.1 bits (144), Expect(2) = 1e-10
 Identities = 26/62 (41%), Positives = 39/62 (62%)
 Frame = -3

Query: 574 QIPVWVKFSNVPHSYWCMEGLSYLASALGTPVSLDKPTSALEPLKFARICINLSASSARP 395
           ++PVWV   NVP  YW ++GLS +ASA+G P+  D  T   + L +AR+C+ + AS    
Sbjct: 239 RVPVWVWLYNVPLEYWTIKGLSCVASAIGVPLHADHTTFLRKRLSYARVCVEIDASKTLV 298

Query: 394 KQ 389
           K+
Sbjct: 299 KE 300



 Score = 31.2 bits (69), Expect(2) = 1e-10
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -2

Query: 347 VYVKVEVDYPIMPPSCSLCKCFGHPIFKCPNNDLS 243
           +++ +  +Y  +P  CS C  FGH    C  N+++
Sbjct: 309 LFITISAEYEWIPSKCSNCNVFGHTRTLCATNNIN 343


>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 60.5 bits (145), Expect(2) = 2e-09
 Identities = 25/62 (40%), Positives = 39/62 (62%)
 Frame = -3

Query: 574 QIPVWVKFSNVPHSYWCMEGLSYLASALGTPVSLDKPTSALEPLKFARICINLSASSARP 395
           ++PVWV+  NVP  YW ++GLS +ASA+G P+  D  T   + L + R+C+ + AS    
Sbjct: 92  RVPVWVRLYNVPLEYWTIKGLSCVASAIGVPLHADHTTLLRKRLSYVRVCVEIDASKTLV 151

Query: 394 KQ 389
           K+
Sbjct: 152 KE 153



 Score = 26.6 bits (57), Expect(2) = 2e-09
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -2

Query: 347 VYVKVEVDYPIMPPSCSLCKCFGHPIFKCPNNDL 246
           +++ +  +Y  +P  CS    FGH    C  N++
Sbjct: 162 LFITISAEYEWIPSKCSNYNVFGHTTPLCATNNI 195


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