BLASTX nr result

ID: Bupleurum21_contig00037491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037491
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72981.1| hypothetical protein VITISV_009032 [Vitis vinifera]    88   8e-16
emb|CBI17512.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002266664.2| PREDICTED: LOW QUALITY PROTEIN: GATA transcr...    80   2e-13
ref|XP_003548888.1| PREDICTED: GATA transcription factor 18-like...    74   1e-11
ref|XP_002521591.1| GATA transcription factor, putative [Ricinus...    72   5e-11

>emb|CAN72981.1| hypothetical protein VITISV_009032 [Vitis vinifera]
          Length = 324

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 49/80 (61%), Positives = 55/80 (68%)
 Frame = -3

Query: 318 KMQRCSSSHQGNMGGQCTCGLFHGQTSNSFSMLFSMPPNKPYDEFSDYXXXXXXXXXXXX 139
           +M RCSSS QGNM G CTCGLFH Q SNSFSMLFSMP +KP+DE   Y            
Sbjct: 75  EMHRCSSS-QGNMAGPCTCGLFHNQ-SNSFSMLFSMPNHKPFDETDMY-------PFTSS 125

Query: 138 XXXAVDCTLSLGTPSTRLSN 79
              +VDCTLSLGTPSTRL++
Sbjct: 126 SSSSVDCTLSLGTPSTRLTD 145


>emb|CBI17512.3| unnamed protein product [Vitis vinifera]
          Length = 285

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 49/79 (62%), Positives = 54/79 (68%)
 Frame = -3

Query: 315 MQRCSSSHQGNMGGQCTCGLFHGQTSNSFSMLFSMPPNKPYDEFSDYXXXXXXXXXXXXX 136
           M RCSSS QGNM G CTCGLFH Q SNSFSMLFSMP +KP+DE   Y             
Sbjct: 1   MHRCSSS-QGNMAGPCTCGLFHNQ-SNSFSMLFSMPNHKPFDETDMY-------PFTSSS 51

Query: 135 XXAVDCTLSLGTPSTRLSN 79
             +VDCTLSLGTPSTRL++
Sbjct: 52  SSSVDCTLSLGTPSTRLTD 70


>ref|XP_002266664.2| PREDICTED: LOW QUALITY PROTEIN: GATA transcription factor 18-like
           [Vitis vinifera]
          Length = 294

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 43/71 (60%), Positives = 48/71 (67%)
 Frame = -3

Query: 291 QGNMGGQCTCGLFHGQTSNSFSMLFSMPPNKPYDEFSDYXXXXXXXXXXXXXXXAVDCTL 112
           QGNM G CTCGLFH Q SNSFSMLFSMP +KP+DE   Y               +VDCTL
Sbjct: 53  QGNMAGPCTCGLFHNQ-SNSFSMLFSMPNHKPFDETDMY-------PFTSSSSSSVDCTL 104

Query: 111 SLGTPSTRLSN 79
           SLGTPSTRL++
Sbjct: 105 SLGTPSTRLTD 115


>ref|XP_003548888.1| PREDICTED: GATA transcription factor 18-like [Glycine max]
          Length = 251

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/80 (46%), Positives = 48/80 (60%)
 Frame = -3

Query: 315 MQRCSSSHQGNMGGQCTCGLFHGQTSNSFSMLFSMPPNKPYDEFSDYXXXXXXXXXXXXX 136
           M  C  S QG++ G CTCG++H +TS   SMLFS+P N  YD +S +             
Sbjct: 2   MHHCCGSSQGHVMGTCTCGMYHSETSAYGSMLFSVPNNSEYDMYSSF----------TPS 51

Query: 135 XXAVDCTLSLGTPSTRLSNE 76
             +VDCTLSLGTPSTRL+ +
Sbjct: 52  PSSVDCTLSLGTPSTRLTQD 71


>ref|XP_002521591.1| GATA transcription factor, putative [Ricinus communis]
           gi|223539269|gb|EEF40862.1| GATA transcription factor,
           putative [Ricinus communis]
          Length = 332

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/94 (45%), Positives = 53/94 (56%)
 Frame = -3

Query: 357 LILLSSQLKHTRIKMQRCSSSHQGNMGGQCTCGLFHGQTSNSFSMLFSMPPNKPYDEFSD 178
           L++   Q+      +  CSS    N  GQCTCGLFH QT NSF+MLFSMP N P++ + D
Sbjct: 68  LVIGEGQIHGRLFPLVTCSS----NTVGQCTCGLFHTQT-NSFTMLFSMPNNHPHNSY-D 121

Query: 177 YXXXXXXXXXXXXXXXAVDCTLSLGTPSTRLSNE 76
                           +VDCTLSLGTPSTRL  +
Sbjct: 122 ETDMYPFPSSSSSSSSSVDCTLSLGTPSTRLCED 155


Top