BLASTX nr result

ID: Bupleurum21_contig00037487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037487
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283965.1| PREDICTED: putative E3 ubiquitin-protein lig...   132   2e-39
ref|XP_002283974.1| PREDICTED: putative E3 ubiquitin-protein lig...   132   2e-39
emb|CAN68755.1| hypothetical protein VITISV_035532 [Vitis vinifera]   132   2e-39
ref|XP_002299878.1| predicted protein [Populus trichocarpa] gi|2...   128   2e-36
gb|AEW69785.1| Hop-interacting protein THI012 [Solanum lycopersi...   108   2e-33

>ref|XP_002283965.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 isoform 1
           [Vitis vinifera]
          Length = 445

 Score =  132 bits (333), Expect(2) = 2e-39
 Identities = 58/69 (84%), Positives = 61/69 (88%)
 Frame = -3

Query: 603 CFDQVCTIEVQDCGHQMCAQCTLSLCCHNKPNPTNACLTAPVCPFCRSTIAQLVVAKIKA 424
           CFDQVCTIEVQDCGHQMCAQCTL+LCCHNKPNPT ACLTAPVCPFCRS IA+L VAKIK 
Sbjct: 324 CFDQVCTIEVQDCGHQMCAQCTLALCCHNKPNPTTACLTAPVCPFCRSGIARLAVAKIKT 383

Query: 423 GNETDPN*G 397
            NE D + G
Sbjct: 384 NNEADSDVG 392



 Score = 55.8 bits (133), Expect(2) = 2e-39
 Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
 Frame = -1

Query: 404 IKDLTFMNLGKSR--RLYSEGSSSFKNLSTIGSFGRMSTRGSGKVAADIEGLDKP 246
           + D++   L +SR  R  SEGSSSFK LS +GSF +M  RGSG++AA+ E +DKP
Sbjct: 391 VGDVSSSKLRRSRKSRNLSEGSSSFKGLSAVGSFSKMGGRGSGRIAAENEWIDKP 445


>ref|XP_002283974.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 isoform 2
           [Vitis vinifera]
          Length = 438

 Score =  132 bits (333), Expect(2) = 2e-39
 Identities = 58/69 (84%), Positives = 61/69 (88%)
 Frame = -3

Query: 603 CFDQVCTIEVQDCGHQMCAQCTLSLCCHNKPNPTNACLTAPVCPFCRSTIAQLVVAKIKA 424
           CFDQVCTIEVQDCGHQMCAQCTL+LCCHNKPNPT ACLTAPVCPFCRS IA+L VAKIK 
Sbjct: 317 CFDQVCTIEVQDCGHQMCAQCTLALCCHNKPNPTTACLTAPVCPFCRSGIARLAVAKIKT 376

Query: 423 GNETDPN*G 397
            NE D + G
Sbjct: 377 NNEADSDVG 385



 Score = 55.8 bits (133), Expect(2) = 2e-39
 Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
 Frame = -1

Query: 404 IKDLTFMNLGKSR--RLYSEGSSSFKNLSTIGSFGRMSTRGSGKVAADIEGLDKP 246
           + D++   L +SR  R  SEGSSSFK LS +GSF +M  RGSG++AA+ E +DKP
Sbjct: 384 VGDVSSSKLRRSRKSRNLSEGSSSFKGLSAVGSFSKMGGRGSGRIAAENEWIDKP 438


>emb|CAN68755.1| hypothetical protein VITISV_035532 [Vitis vinifera]
          Length = 166

 Score =  132 bits (333), Expect(2) = 2e-39
 Identities = 58/69 (84%), Positives = 61/69 (88%)
 Frame = -3

Query: 603 CFDQVCTIEVQDCGHQMCAQCTLSLCCHNKPNPTNACLTAPVCPFCRSTIAQLVVAKIKA 424
           CFDQVCTIEVQDCGHQMCAQCTL+LCCHNKPNPT ACLTAPVCPFCRS IA+L VAKIK 
Sbjct: 45  CFDQVCTIEVQDCGHQMCAQCTLALCCHNKPNPTTACLTAPVCPFCRSGIARLAVAKIKT 104

Query: 423 GNETDPN*G 397
            NE D + G
Sbjct: 105 NNEADSDXG 113



 Score = 55.5 bits (132), Expect(2) = 2e-39
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = -1

Query: 374 KSRRLYSEGSSSFKNLSTIGSFGRMSTRGSGKVAADIEGLDKP 246
           KSR L SEGSSSFK LS +GSF +M  RGSG++AA+ E +DKP
Sbjct: 125 KSRNL-SEGSSSFKGLSAVGSFSKMGGRGSGRIAAENEWIDKP 166


>ref|XP_002299878.1| predicted protein [Populus trichocarpa] gi|222847136|gb|EEE84683.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  128 bits (321), Expect(2) = 2e-36
 Identities = 55/69 (79%), Positives = 62/69 (89%)
 Frame = -3

Query: 603 CFDQVCTIEVQDCGHQMCAQCTLSLCCHNKPNPTNACLTAPVCPFCRSTIAQLVVAKIKA 424
           CF+QVCTIEV+DCGHQMCAQCTL+LCCHNKPNPT ACLT PVCPFCRSTIA+LVVAK+K 
Sbjct: 323 CFEQVCTIEVEDCGHQMCAQCTLALCCHNKPNPTTACLTPPVCPFCRSTIARLVVAKMKD 382

Query: 423 GNETDPN*G 397
            N+ D + G
Sbjct: 383 CNDADQDIG 391



 Score = 50.1 bits (118), Expect(2) = 2e-36
 Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
 Frame = -1

Query: 404 IKDLTFMNLGKSRRL--YSEGSSSFKNLSTIGSFGRMSTRGSGKVAADIEGLDKP 246
           I D+    L KSRR   +SEGSSSFK LS   +FG+M  RGSG++AA+ E +DKP
Sbjct: 390 IGDVGSPKLRKSRRSLNFSEGSSSFKGLSA--TFGKMGGRGSGRIAAENEWVDKP 442


>gb|AEW69785.1| Hop-interacting protein THI012 [Solanum lycopersicum]
          Length = 446

 Score =  108 bits (271), Expect(2) = 2e-33
 Identities = 45/65 (69%), Positives = 49/65 (75%)
 Frame = -3

Query: 603 CFDQVCTIEVQDCGHQMCAQCTLSLCCHNKPNPTNACLTAPVCPFCRSTIAQLVVAKIKA 424
           CFDQ+CTIEVQDCGHQMCA C L+LCCHNKPNPT      PVCPFCRS I QL   K+  
Sbjct: 324 CFDQLCTIEVQDCGHQMCAHCVLALCCHNKPNPTTTSPPEPVCPFCRSNIVQLQAIKVTK 383

Query: 423 GNETD 409
            N+TD
Sbjct: 384 NNDTD 388



 Score = 59.3 bits (142), Expect(2) = 2e-33
 Identities = 31/53 (58%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
 Frame = -1

Query: 398 DLTFMNLGKSRRL--YSEGSSSFKNLSTIGSFGRMSTRGSGKVAADIEGLDKP 246
           DL    L K+RR   +SEGSSSFK LS + SFG+M+ RGSG++AAD E +DKP
Sbjct: 390 DLHSSKLRKTRRSRNFSEGSSSFKGLSAVSSFGKMTGRGSGRIAADNEWIDKP 442


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