BLASTX nr result
ID: Bupleurum21_contig00037480
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00037480 (513 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002529415.1| mom(plant), putative [Ricinus communis] gi|2... 110 2e-22 ref|XP_002318937.1| chromatin remodeling complex subunit [Populu... 108 5e-22 ref|XP_002328309.1| chromatin remodeling complex subunit [Populu... 105 4e-21 ref|XP_002330022.1| chromatin remodeling complex subunit [Populu... 100 1e-19 ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258... 100 2e-19 >ref|XP_002529415.1| mom(plant), putative [Ricinus communis] gi|223531092|gb|EEF32941.1| mom(plant), putative [Ricinus communis] Length = 1982 Score = 110 bits (274), Expect = 2e-22 Identities = 61/136 (44%), Positives = 83/136 (61%), Gaps = 3/136 (2%) Frame = +2 Query: 110 SEKSMLPNAKKSLHLSVKPDILKLCEILKLSDEVKIMVEKFLVYVISNHEVVKSDSANIL 289 +E+ + +++KSLHL +KPD+ KLCEILKL D VK MV+ FL YV++NH V++ + A IL Sbjct: 882 NERINVHDSQKSLHLLLKPDMAKLCEILKLPDNVKAMVQSFLEYVMNNHHVIR-EPATIL 940 Query: 290 QAFXXXXXXXXXXXXKQKIDRKECLLLARQHLKFSCNENEADSMYSAVQKLEKAF---EE 460 QAF K KID KE L LA+QHL F C + EAD +YS + L+K F Sbjct: 941 QAFQISLCWTAASLLKHKIDHKESLALAKQHLNFGCKKEEADYVYSKFRCLKKVFLYHTG 1000 Query: 461 NILSDLSKDGLSGVER 508 N++ S + V R Sbjct: 1001 NVMLTCSSENSQSVTR 1016 >ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222857313|gb|EEE94860.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 2283 Score = 108 bits (270), Expect = 5e-22 Identities = 55/115 (47%), Positives = 80/115 (69%) Frame = +2 Query: 110 SEKSMLPNAKKSLHLSVKPDILKLCEILKLSDEVKIMVEKFLVYVISNHEVVKSDSANIL 289 +E+ L +++KSLHL +KP+I KLCEIL+L + VK+MVE+FL YV++NH + + + A+IL Sbjct: 1258 NERMNLHDSEKSLHLILKPEITKLCEILQLPENVKVMVERFLEYVLNNHHISR-EPASIL 1316 Query: 290 QAFXXXXXXXXXXXXKQKIDRKECLLLARQHLKFSCNENEADSMYSAVQKLEKAF 454 QAF K K+ KE L LA+QHL F C ++EAD +YS ++ L+KAF Sbjct: 1317 QAFLISLCWTSASMLKHKLGHKESLALAKQHLNFGCKKDEADFVYSKLRCLKKAF 1371 >ref|XP_002328309.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222837824|gb|EEE76189.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1996 Score = 105 bits (262), Expect = 4e-21 Identities = 55/115 (47%), Positives = 80/115 (69%) Frame = +2 Query: 110 SEKSMLPNAKKSLHLSVKPDILKLCEILKLSDEVKIMVEKFLVYVISNHEVVKSDSANIL 289 +E+ L ++KSLHL +KP+I KL EIL+L ++VK+MV++FL YV++NH V + + A+IL Sbjct: 916 NERMNLHYSRKSLHLVLKPEIEKLSEILQLPEDVKVMVDQFLEYVLNNHHVSR-EPASIL 974 Query: 290 QAFXXXXXXXXXXXXKQKIDRKECLLLARQHLKFSCNENEADSMYSAVQKLEKAF 454 QAF K K+DRKE L LA+QHL F C ++EAD +YS ++ L+K F Sbjct: 975 QAFLISLCWTAASMIKYKLDRKESLALAKQHLNFCCTKDEADFVYSKLRYLKKVF 1029 >ref|XP_002330022.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222871447|gb|EEF08578.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1441 Score = 100 bits (249), Expect = 1e-19 Identities = 50/113 (44%), Positives = 76/113 (67%) Frame = +2 Query: 116 KSMLPNAKKSLHLSVKPDILKLCEILKLSDEVKIMVEKFLVYVISNHEVVKSDSANILQA 295 +++ +++KSLHL +KP+I KLCEIL+L + VK+MVE+F YV++NH V + + ++LQ Sbjct: 328 RNLHDDSEKSLHLFLKPEIAKLCEILQLPENVKVMVEQFREYVLNNHHVSR-EPPSLLQG 386 Query: 296 FXXXXXXXXXXXXKQKIDRKECLLLARQHLKFSCNENEADSMYSAVQKLEKAF 454 F K K+D KE L LA++HL FSC ++EAD +YS ++ L K F Sbjct: 387 FLISLCWTAASMLKHKLDHKESLALAKEHLNFSCKKDEADFVYSKLRCLRKLF 439 >ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258707 [Vitis vinifera] Length = 1534 Score = 100 bits (248), Expect = 2e-19 Identities = 72/186 (38%), Positives = 105/186 (56%), Gaps = 23/186 (12%) Frame = +2 Query: 8 GESRILGSNGSCCLKRP-----DVIETNPLDTAEVPLV--VSEKSM------------LP 130 G S I +N S L RP D + N T+ PLV +SE S L Sbjct: 621 GASGISANNESQSLSRPTACTHDALHANRASTSP-PLVSDISEASSEIHTIEFEGRRKLR 679 Query: 131 NAKKSLHLSVKPDILKLCEILKLSDEVKIMVEKFLVYVISNHEVVKSDSANILQAFXXXX 310 +A+KSLHL ++ DI KLC+IL+LS++VK MV + L YV++NH V + + A+ILQAF Sbjct: 680 DAQKSLHLVLETDISKLCDILQLSEDVKGMVGRLLEYVMNNHHVNR-EPASILQAFQISL 738 Query: 311 XXXXXXXXKQKIDRKECLLLARQHLKFSCNENEADSMYSAVQKLEKAFE---ENI-LSDL 478 +IDRK L+LA+QHL F+C E E + +YS + L++ F+ EN+ ++D Sbjct: 739 CWTAASLMNHEIDRKGSLMLAKQHLAFTCKEEEVEYVYSKLHSLKEKFQYRSENLRVADF 798 Query: 479 SKDGLS 496 +D +S Sbjct: 799 EQDLMS 804