BLASTX nr result

ID: Bupleurum21_contig00037460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037460
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694...    79   5e-13
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    77   2e-12
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        71   8e-11
gb|AAF63113.1|AC006423_14 Hypothetical protein [Arabidopsis thal...    71   8e-11

>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
            predicted protein [Populus trichocarpa]
          Length = 819

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 3/154 (1%)
 Frame = -2

Query: 455  HCPAAVNLGFTHARILKPFQVYHHMLHHPNFLETVKSAWTAPVVGDCWFVLTTKLKRVKQ 276
            H P  V +        KPF+ +   + H  F+  VK  W     G   + L  KL+++KQ
Sbjct: 604  HSPMVVKVIGNDQNKKKPFRFFDMWMDHDEFMPLVKKVWDQNSRGCPMYQLCCKLRKLKQ 663

Query: 275  ALKSLNNS-IGNVHLAVQEARNELYNLQNSISGIPTENQII--EERNLMLKYQAALDSEE 105
             LK  N +   N+   V++A+N++   Q ++     EN I+   ER+++ KY + + +EE
Sbjct: 664  ELKLFNMAHFSNISDRVRDAKNKMDKAQQALH-TAHENPILCMRERDVVHKYASTVRAEE 722

Query: 104  QFLHQKSKVHWLQKGDGNNRFFFNYCRGRWNTNR 3
             F  QK+++ WL  GD N  +F     GR N N+
Sbjct: 723  SFFKQKARIQWLSLGDQNTSYFHKSVNGRQNRNK 756


>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
           putative protein [Arabidopsis thaliana]
          Length = 1141

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 2/152 (1%)
 Frame = -2

Query: 455 HCPAAVNLGFTHARILKPFQVYHHMLHHPNFLETVKSAW-TAPVVGDCWFVLTTKLKRVK 279
           H    V L     +  +PF+ ++ +L +P FL  V   W +  VVG   F ++ KLK +K
Sbjct: 223 HASCGVVLELDPIKAKRPFKFFNFLLKNPEFLNLVWDVWYSTNVVGSSMFRVSKKLKALK 282

Query: 278 QALKSLNN-SIGNVHLAVQEARNELYNLQNSISGIPTENQIIEERNLMLKYQAALDSEEQ 102
           + +K  +  +  N+    +EA   L + QN     P+      E     K+Q    +EE 
Sbjct: 283 KPIKDFSRLNYSNLEKRTEEAHETLLSFQNLTLDNPSLENAAHELEAQRKWQILATAEES 342

Query: 101 FLHQKSKVHWLQKGDGNNRFFFNYCRGRWNTN 6
           F  Q+S+V W  +GDGN R+F      R + N
Sbjct: 343 FFRQRSRVTWFAEGDGNTRYFHRMADSRKSVN 374


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
 Frame = -2

Query: 455 HCPAAVNLGFTHARILKPFQVYHHMLHHPNFLETVKSAW-TAPVVGDCWFVLTTKLKRVK 279
           HCP+ VN+        KPF++ + ++HHP F+E ++  W      G   F L+ K K +K
Sbjct: 229 HCPSCVNISNQSGGRNKPFKLSNFLMHHPEFIEKIRVTWDRLAYQGSAMFTLSKKSKFLK 288

Query: 278 QALKSLNNS-IGNVHLAVQEARNELYNLQNSISGIPTENQIIEERNLMLKYQAALDSEEQ 102
             +++ N      +   V +A   L   QN++   P+      E+     +     +EE+
Sbjct: 289 GTIRTFNREHYSGLEKRVVQAAQNLKTCQNNLLAAPSSYLAGLEKEAHRSWAELALAEER 348

Query: 101 FLHQKSKVHWLQKGDGNNRFFFNYCRGR 18
           FL QKS+V WL+ GD N  FF      R
Sbjct: 349 FLCQKSRVLWLKCGDSNTTFFHRMMTAR 376


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
 Frame = -2

Query: 455 HCPAAVNLGFTHARILKPFQVYHHMLHHPNFLETVKSAW-TAPVVGDCWFVLTTKLKRVK 279
           H    V L  T  +  +PF+ ++++L + +FL  V+  W T  VVG   F ++ KLK +K
Sbjct: 231 HVSCGVVLEETSIKAKRPFKFFNYLLKNLDFLNLVRDNWFTLNVVGSSMFRVSKKLKALK 290

Query: 278 QALKSLNN-SIGNVHLAVQEARNELYNLQNSISGIPTENQIIEERNLMLKYQAALDSEEQ 102
           + +K  +  +   +    +EA + L   Q+     PT      E     K+     +EE 
Sbjct: 291 KPIKDFSRLNYSELEKRTKEAHDFLIGCQDRTLADPTPINASFELEAERKWHILTAAEES 350

Query: 101 FLHQKSKVHWLQKGDGNNRFFFNYCRGRWNTN 6
           F  QKS++ W  +GDGN ++F      R ++N
Sbjct: 351 FFRQKSRISWFAEGDGNTKYFHRMADARNSSN 382


>gb|AAF63113.1|AC006423_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 668

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 2/141 (1%)
 Frame = -2

Query: 455 HCPAAVNLGFTHARILKPFQVYHHMLHHPNFLETVKSAWTAPV-VGDCWFVLTTKLKRVK 279
           H P  + L     R  K F+ +  +  HP FL ++  AW   + VG   F L   LK  K
Sbjct: 250 HSPCIIILENLPKRSKKCFRYFSFLSTHPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAK 309

Query: 278 QALKSLNNS-IGNVHLAVQEARNELYNLQNSISGIPTENQIIEERNLMLKYQAALDSEEQ 102
           +  K LN    GN+    +EA + L ++Q+ +   P+++    E     K+     + E 
Sbjct: 310 KCCKLLNRQGFGNIQHKTKEALDSLESIQSQLLTNPSDSLFRVEHVARKKWNFFAAALES 369

Query: 101 FLHQKSKVHWLQKGDGNNRFF 39
           F  QKS++ WLQ GD N RFF
Sbjct: 370 FYRQKSRIKWLQDGDANTRFF 390


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