BLASTX nr result

ID: Bupleurum21_contig00037459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037459
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275445.2| PREDICTED: uncharacterized protein LOC100249...    97   1e-18
emb|CBI31517.3| unnamed protein product [Vitis vinifera]               97   1e-18
emb|CAN75604.1| hypothetical protein VITISV_016383 [Vitis vinifera]    94   9e-18
ref|XP_002462918.1| hypothetical protein SORBIDRAFT_02g034460 [S...    85   5e-15
ref|XP_003569035.1| PREDICTED: uncharacterized protein LOC100830...    84   1e-14

>ref|XP_002275445.2| PREDICTED: uncharacterized protein LOC100249659 [Vitis vinifera]
          Length = 384

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 60/141 (42%), Positives = 87/141 (61%), Gaps = 7/141 (4%)
 Frame = +3

Query: 33  TFKNIIDYNSS--QSLKIANQRKVEHMENNVHQREEKMSTPEFIEPRRPSY-----LRKS 191
           T K ++D  +   +     N  ++E+  +   QRE +    + +EP  PS      LR+S
Sbjct: 87  TSKGVLDPENDDFELFDTGNSLELENAADIFGQREHEYLPSDSLEPEIPSRDGKFNLRQS 146

Query: 192 IAWDNAFFCSAGVLDHEELSAINKGFKGQECSLFPGLPEDLKARRSADSDLTFESLDSDA 371
           +AWD+AFF S GVLD EEL  INKGFK  +  L PG+ E+L  +RSA+S+ T   +DSD 
Sbjct: 147 LAWDSAFFTSEGVLDPEELFMINKGFKKAKTRLLPGIKEEL--QRSAESNST---IDSDR 201

Query: 372 FSVDSFQGELFEDVRASIYRS 434
           FS++S + +LFED+RASI +S
Sbjct: 202 FSLESLEIDLFEDIRASIQKS 222


>emb|CBI31517.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 60/141 (42%), Positives = 87/141 (61%), Gaps = 7/141 (4%)
 Frame = +3

Query: 33  TFKNIIDYNSS--QSLKIANQRKVEHMENNVHQREEKMSTPEFIEPRRPSY-----LRKS 191
           T K ++D  +   +     N  ++E+  +   QRE +    + +EP  PS      LR+S
Sbjct: 85  TSKGVLDPENDDFELFDTGNSLELENAADIFGQREHEYLPSDSLEPEIPSRDGKFNLRQS 144

Query: 192 IAWDNAFFCSAGVLDHEELSAINKGFKGQECSLFPGLPEDLKARRSADSDLTFESLDSDA 371
           +AWD+AFF S GVLD EEL  INKGFK  +  L PG+ E+L  +RSA+S+ T   +DSD 
Sbjct: 145 LAWDSAFFTSEGVLDPEELFMINKGFKKAKTRLLPGIKEEL--QRSAESNST---IDSDR 199

Query: 372 FSVDSFQGELFEDVRASIYRS 434
           FS++S + +LFED+RASI +S
Sbjct: 200 FSLESLEIDLFEDIRASIQKS 220


>emb|CAN75604.1| hypothetical protein VITISV_016383 [Vitis vinifera]
          Length = 760

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 59/141 (41%), Positives = 86/141 (60%), Gaps = 7/141 (4%)
 Frame = +3

Query: 33  TFKNIIDYNSS--QSLKIANQRKVEHMENNVHQREEKMSTPEFIEPRRPSY-----LRKS 191
           T K ++D  +   +     N  ++E+  +   QRE +    + +EP   S      LR+S
Sbjct: 85  TSKGVLDPENDDFELFDTGNSLELENAADIFGQREREYLPSDSLEPEIXSRDGKFNLRQS 144

Query: 192 IAWDNAFFCSAGVLDHEELSAINKGFKGQECSLFPGLPEDLKARRSADSDLTFESLDSDA 371
           +AWD+AFF S GVLD EEL  INKGFK  +  L PG+ E+L  +RSA+S+ T   +DSD 
Sbjct: 145 LAWDSAFFTSEGVLDPEELFMINKGFKKAKTHLLPGIKEEL--QRSAESNST---IDSDR 199

Query: 372 FSVDSFQGELFEDVRASIYRS 434
           FS++S + +LFED+RASI +S
Sbjct: 200 FSLESLEIDLFEDIRASIQKS 220


>ref|XP_002462918.1| hypothetical protein SORBIDRAFT_02g034460 [Sorghum bicolor]
           gi|241926295|gb|EER99439.1| hypothetical protein
           SORBIDRAFT_02g034460 [Sorghum bicolor]
          Length = 787

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/105 (43%), Positives = 71/105 (67%)
 Frame = +3

Query: 126 REEKMSTPEFIEPRRPSYLRKSIAWDNAFFCSAGVLDHEELSAINKGFKGQECSLFPGLP 305
           R E+  +PE  + ++   LRKS+AWD+AFF S GVLD EEL+ +N  F+  + S  PG+ 
Sbjct: 103 RPERTESPEQRKAKKGVNLRKSLAWDSAFFTSEGVLDTEELAIVNSTFRKTQGSRLPGIM 162

Query: 306 EDLKARRSADSDLTFESLDSDAFSVDSFQGELFEDVRASIYRSCG 440
           E++  RRS +S  T  +L+ + ++++S + ELF++VRASI RS G
Sbjct: 163 EEM--RRSGES--TTSTLEGETWAMESLETELFDNVRASIQRSLG 203


>ref|XP_003569035.1| PREDICTED: uncharacterized protein LOC100830111 [Brachypodium
           distachyon]
          Length = 864

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 50/107 (46%), Positives = 70/107 (65%), Gaps = 1/107 (0%)
 Frame = +3

Query: 123 QREEKMSTPEFIEPRRPSYLRKSIAWDNAFFCSAGVLDHEELSAINKGF-KGQECSLFPG 299
           Q  E   +P+  + +    LRKS+AWD+AFF S GVLD EEL  +N  F K Q   L PG
Sbjct: 69  QVPEPTGSPKIRKAKSGVNLRKSLAWDSAFFTSEGVLDTEELGIVNSTFRKAQVSRLLPG 128

Query: 300 LPEDLKARRSADSDLTFESLDSDAFSVDSFQGELFEDVRASIYRSCG 440
           + E+L  RRSA+S  T  +L+S++F ++S + ELF++VRASI R+ G
Sbjct: 129 IAEEL--RRSAES--TTSTLESESFVLESVETELFDNVRASIQRTLG 171


Top