BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037446
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521241.1| pentatricopeptide repeat-containing protein,...   191   5e-47
emb|CBI37820.3| unnamed protein product [Vitis vinifera]              188   3e-46
ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containi...   188   3e-46
emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]   188   3e-46
ref|XP_002312939.1| predicted protein [Populus trichocarpa] gi|2...   185   4e-45

>ref|XP_002521241.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539509|gb|EEF41097.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 662

 Score =  191 bits (485), Expect = 5e-47
 Identities = 99/132 (75%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
 Frame = -3

Query: 395 MISGYAQIGNLKFARDFFQRMPQKNLVSWNSIIAGCERNMDYEGAIKLFGQMQLTGEKPD 216
           MISGYAQ G+L+ A DFF+RMPQKNLVSWNS+IAG E+N DY GAI LF QMQ+ GEK D
Sbjct: 354 MISGYAQSGSLELAHDFFERMPQKNLVSWNSVIAGYEKNGDYIGAINLFIQMQVEGEKSD 413

Query: 215 RHTLSSLLSVCAELVALHLGMQIHQLVIKVVIPDVPLNNSIITMYARCGAIAAARYIFDE 36
           RHTLSSLLSV + +V L LGMQIHQLV K VIPDVPLNN++ITMY+RCGAI  AR IF E
Sbjct: 414 RHTLSSLLSVSSGIVDLQLGMQIHQLVSKTVIPDVPLNNALITMYSRCGAIFEARTIFYE 473

Query: 35  MKL-REVISWNA 3
           MKL +EVISWNA
Sbjct: 474 MKLQKEVISWNA 485



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 13/144 (9%)
 Frame = -3

Query: 395 MISGYAQIGNLKFARDFFQRMP-------------QKNLVSWNSIIAGCERNMDYEGAIK 255
           +I+GY Q G +  A++ F ++P             ++N+VSWN++I    +  D   A K
Sbjct: 248 LIAGYGQRGRVDEAQNLFDKIPFYNDQGKGRTGRFERNVVSWNTMIMCYVKAGDVISARK 307

Query: 254 LFGQMQLTGEKPDRHTLSSLLSVCAELVALHLGMQIHQLVIKVVIPDVPLNNSIITMYAR 75
           LF QM      PDR + S    +   +  L +  +   L  K+  PD    N +I+ YA+
Sbjct: 308 LFDQM------PDRDSFSWNTMISGYVHVLDME-EASNLFHKMPSPDTLSWNLMISGYAQ 360

Query: 74  CGAIAAARYIFDEMKLREVISWNA 3
            G++  A   F+ M  + ++SWN+
Sbjct: 361 SGSLELAHDFFERMPQKNLVSWNS 384



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 21/151 (13%)
 Frame = -3

Query: 395 MISGYAQIGNLKFARDFFQRMPQKNLVSWNSIIAGCERNMDYEGAIKLFGQMQLTGEKPD 216
           MISGYA+ G +  A   F  MP+KN VSWN++++G  +N D   AI+ F +M     + D
Sbjct: 149 MISGYAKNGRMDEALGLFNTMPEKNSVSWNAMVSGFLQNGDVVRAIEFFKRM----PERD 204

Query: 215 RHTLSSLLSVC--------AELVALHLGMQIHQLVIKVVIPDVPLNNSIITMYARCGAIA 60
             +LS+L+S          AE + L  G              V   N++I  Y + G + 
Sbjct: 205 VTSLSALVSGLIQNSELDQAERILLDYGNNGGSKEYL-----VHAYNTLIAGYGQRGRVD 259

Query: 59  AARYIFDEMKL-------------REVISWN 6
            A+ +FD++               R V+SWN
Sbjct: 260 EAQNLFDKIPFYNDQGKGRTGRFERNVVSWN 290


>emb|CBI37820.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  188 bits (478), Expect = 3e-46
 Identities = 93/132 (70%), Positives = 109/132 (82%), Gaps = 1/132 (0%)
 Frame = -3

Query: 395 MISGYAQIGNLKFARDFFQRMPQKNLVSWNSIIAGCERNMDYEGAIKLFGQMQLTGEKPD 216
           MISG+AQ GNL+ AR  F  +PQKNLVSWNS+IAG E N DY+GA +L+ QM L GEKPD
Sbjct: 195 MISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPD 254

Query: 215 RHTLSSLLSVCAELVALHLGMQIHQLVIKVVIPDVPLNNSIITMYARCGAIAAARYIFDE 36
           RHTLSS+LSVC+   ALHLGMQIHQ + K VIPD+P+NNS+ITMY+RCGAI  AR IFDE
Sbjct: 255 RHTLSSVLSVCSGFAALHLGMQIHQQITKTVIPDIPINNSLITMYSRCGAIVEARTIFDE 314

Query: 35  MKL-REVISWNA 3
           +KL +EVISWNA
Sbjct: 315 VKLQKEVISWNA 326


>ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Vitis vinifera]
          Length = 681

 Score =  188 bits (478), Expect = 3e-46
 Identities = 93/132 (70%), Positives = 109/132 (82%), Gaps = 1/132 (0%)
 Frame = -3

Query: 395 MISGYAQIGNLKFARDFFQRMPQKNLVSWNSIIAGCERNMDYEGAIKLFGQMQLTGEKPD 216
           MISG+AQ GNL+ AR  F  +PQKNLVSWNS+IAG E N DY+GA +L+ QM L GEKPD
Sbjct: 372 MISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPD 431

Query: 215 RHTLSSLLSVCAELVALHLGMQIHQLVIKVVIPDVPLNNSIITMYARCGAIAAARYIFDE 36
           RHTLSS+LSVC+   ALHLGMQIHQ + K VIPD+P+NNS+ITMY+RCGAI  AR IFDE
Sbjct: 432 RHTLSSVLSVCSGFAALHLGMQIHQQITKTVIPDIPINNSLITMYSRCGAIVEARTIFDE 491

Query: 35  MKL-REVISWNA 3
           +KL +EVISWNA
Sbjct: 492 VKLQKEVISWNA 503



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
 Frame = -3

Query: 392 ISGYAQIGNLKFARDFFQRMPQKNLVSWNSIIAGCERNMDYEGAIKLFGQMQLTGEKPDR 213
           IS   + G +  AR  F  MPQ+N+V+WNS+I G  R  +   A KLF +M      PDR
Sbjct: 74  ISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDEM------PDR 127

Query: 212 HTLSSLLSVCAELVALHLGMQI-HQLVIKVVIPDVPLNNSIITMYARCGAIAAARYIFDE 36
             +S  L +   +      ++    L  ++   D    N++I+ Y R G +  A  +FD 
Sbjct: 128 DVVSWNLMISGYVSCQGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLFDS 187

Query: 35  MKLREVISWNA 3
           M+ R V+SWNA
Sbjct: 188 MQERNVVSWNA 198



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 18/149 (12%)
 Frame = -3

Query: 395 MISGYAQIGNLKFARDFFQRMPQKNLVSWNSIIAGCERNMDYEGAIKLFGQMQLTGEKPD 216
           MISGY + G +  A   F  M ++N+VSWN+++ G  +N D E AI+ F +M      P+
Sbjct: 168 MISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRM------PE 221

Query: 215 RHTLSSLLSVCAELVALHLGMQIHQLVIKVVIPD------VPLNNSIITMYARCGAIAAA 54
           R + +SL ++ A L+      +  ++++     D      V   N ++  Y + G +  A
Sbjct: 222 RDS-ASLSALVAGLIQNGELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKA 280

Query: 53  RYIFDEMKL------------REVISWNA 3
           R +FD++              R V+SWN+
Sbjct: 281 RQLFDQIPFYDGGQKDGGRFERNVVSWNS 309


>emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]
          Length = 761

 Score =  188 bits (478), Expect = 3e-46
 Identities = 93/132 (70%), Positives = 109/132 (82%), Gaps = 1/132 (0%)
 Frame = -3

Query: 395 MISGYAQIGNLKFARDFFQRMPQKNLVSWNSIIAGCERNMDYEGAIKLFGQMQLTGEKPD 216
           MISG+AQ GNL+ AR  F  +PQKNLVSWNS+IAG E N DY+GA +L+ QM L GEKPD
Sbjct: 372 MISGFAQKGNLELARALFATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPD 431

Query: 215 RHTLSSLLSVCAELVALHLGMQIHQLVIKVVIPDVPLNNSIITMYARCGAIAAARYIFDE 36
           RHTLSS+LSVC+   ALHLGMQIHQ + K VIPD+P+NNS+ITMY+RCGAI  AR IFDE
Sbjct: 432 RHTLSSVLSVCSGFAALHLGMQIHQQITKTVIPDIPINNSLITMYSRCGAIVEARTIFDE 491

Query: 35  MKL-REVISWNA 3
           +KL +EVISWNA
Sbjct: 492 VKLQKEVISWNA 503



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
 Frame = -3

Query: 392 ISGYAQIGNLKFARDFFQRMPQKNLVSWNSIIAGCERNMDYEGAIKLFGQMQLTGEKPDR 213
           IS   + G +  AR  F  MPQ+N+V+WNS+I G  R  +   A KLF +M      PDR
Sbjct: 74  ISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRRREMAKARKLFDEM------PDR 127

Query: 212 HTLSSLLSVCAELVALHLGMQI-HQLVIKVVIPDVPLNNSIITMYARCGAIAAARYIFDE 36
             +S  L +   +      ++    L  ++   D    N++I+ Y R G +  A  +FD 
Sbjct: 128 DVVSWNLMISGYVSCRGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLFDS 187

Query: 35  MKLREVISWNA 3
           M+ R V+SWNA
Sbjct: 188 MQERNVVSWNA 198



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 18/149 (12%)
 Frame = -3

Query: 395 MISGYAQIGNLKFARDFFQRMPQKNLVSWNSIIAGCERNMDYEGAIKLFGQMQLTGEKPD 216
           MISGY + G +  A   F  M ++N+VSWN+++ G  +N D E AI+ F +M      P+
Sbjct: 168 MISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRM------PE 221

Query: 215 RHTLSSLLSVCAELVALHLGMQIHQLVIKVVIPD------VPLNNSIITMYARCGAIAAA 54
           R + +SL ++ A L+      +  ++++     D      V   N ++  Y + G +  A
Sbjct: 222 RDS-ASLSALVAGLIQNGELDEAKRILLTTRRQDDDKGDLVHAYNILLAGYGQNGRVDKA 280

Query: 53  RYIFDEMKL------------REVISWNA 3
           R +FD++              R V+SWN+
Sbjct: 281 RQLFDQIPFYDGGQKDGGRFERNVVSWNS 309


>ref|XP_002312939.1| predicted protein [Populus trichocarpa] gi|222849347|gb|EEE86894.1|
           predicted protein [Populus trichocarpa]
          Length = 610

 Score =  185 bits (469), Expect = 4e-45
 Identities = 94/132 (71%), Positives = 109/132 (82%), Gaps = 1/132 (0%)
 Frame = -3

Query: 395 MISGYAQIGNLKFARDFFQRMPQKNLVSWNSIIAGCERNMDYEGAIKLFGQMQLTGEKPD 216
           MI+G+AQIG+L    D F RMPQKNLVSWNS+I G E+N DY GAIK+F QMQ+ GEKPD
Sbjct: 304 MIAGHAQIGDLDRVNDLFGRMPQKNLVSWNSVITGYEKNDDYIGAIKIFIQMQVEGEKPD 363

Query: 215 RHTLSSLLSVCAELVALHLGMQIHQLVIKVVIPDVPLNNSIITMYARCGAIAAARYIFDE 36
           RHTLSS+LSV A +V L LGMQIHQLV K VIPDVP+NN++ITMY+RCGAI  A  IFDE
Sbjct: 364 RHTLSSVLSVSAGIVDLQLGMQIHQLVTKTVIPDVPINNALITMYSRCGAIIEAGTIFDE 423

Query: 35  MKL-REVISWNA 3
           +KL +EVISWNA
Sbjct: 424 VKLQKEVISWNA 435