BLASTX nr result

ID: Bupleurum21_contig00037438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037438
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519416.1| polyadenylate-binding protein, putative [Ric...    81   1e-13
ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding pr...    80   2e-13
ref|XP_003036186.1| hypothetical protein SCHCODRAFT_66185 [Schiz...    79   5e-13
gb|EIE25350.1| polyadenylate binding protein [Coccomyxa subellip...    78   7e-13
gb|EMD38267.1| hypothetical protein CERSUDRAFT_113433 [Ceriporio...    78   9e-13

>ref|XP_002519416.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223541279|gb|EEF42830.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 632

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/53 (69%), Positives = 46/53 (86%)
 Frame = -2

Query: 354 KNIVDEVDDDELREQFSQCGTIKSAKIMRDERGISKGFGFVCYSASYEADRAV 196
           KNI D+V D+ELRE FSQCGTI SAK+M+D++G SKGFGFVC+S+S EA +AV
Sbjct: 300 KNIDDDVTDEELREHFSQCGTITSAKLMKDDKGRSKGFGFVCFSSSEEASKAV 352


>ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Glycine max]
          Length = 636

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/53 (69%), Positives = 44/53 (83%)
 Frame = -2

Query: 354 KNIVDEVDDDELREQFSQCGTIKSAKIMRDERGISKGFGFVCYSASYEADRAV 196
           KNI D V D+ELR+ FS CGTI SAKIMRD++GISKGFGFVC+S   EA++AV
Sbjct: 299 KNIDDHVSDEELRDHFSACGTITSAKIMRDDKGISKGFGFVCFSTPEEANKAV 351


>ref|XP_003036186.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
           gi|300109882|gb|EFJ01284.1| hypothetical protein
           SCHCODRAFT_66185 [Schizophyllum commune H4-8]
          Length = 632

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 35/57 (61%), Positives = 47/57 (82%)
 Frame = -2

Query: 354 KNIVDEVDDDELREQFSQCGTIKSAKIMRDERGISKGFGFVCYSASYEADRAVALLN 184
           KN+ D+VDD++LR +F   GTI SAK+MRD++G+SKGFGFVCYS+  EA +AVA +N
Sbjct: 335 KNLDDDVDDEKLRAEFEPFGTITSAKVMRDDKGVSKGFGFVCYSSPEEASKAVAEMN 391


>gb|EIE25350.1| polyadenylate binding protein [Coccomyxa subellipsoidea C-169]
          Length = 681

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/57 (64%), Positives = 45/57 (78%)
 Frame = -2

Query: 354 KNIVDEVDDDELREQFSQCGTIKSAKIMRDERGISKGFGFVCYSASYEADRAVALLN 184
           KN+VDEVDDD+LR +F+  GTI SAK+M+D  G SKGFGFVCYS+  EA RAV  +N
Sbjct: 321 KNLVDEVDDDQLRAEFAPHGTITSAKVMKDSAGKSKGFGFVCYSSPEEATRAVTEMN 377


>gb|EMD38267.1| hypothetical protein CERSUDRAFT_113433 [Ceriporiopsis subvermispora
           B]
          Length = 679

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 36/57 (63%), Positives = 46/57 (80%)
 Frame = -2

Query: 354 KNIVDEVDDDELREQFSQCGTIKSAKIMRDERGISKGFGFVCYSASYEADRAVALLN 184
           KN+ DEVDD+ LR++F   GTI SAK+MRDE+G SKGFGFVC+S+  EA +AVA +N
Sbjct: 337 KNLEDEVDDERLRQEFEPFGTITSAKVMRDEKGSSKGFGFVCFSSPDEATKAVAEMN 393



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/57 (50%), Positives = 35/57 (61%)
 Frame = -2

Query: 354 KNIVDEVDDDELREQFSQCGTIKSAKIMRDERGISKGFGFVCYSASYEADRAVALLN 184
           KNI  EV D+E R+ F Q G + SA I RDE G SKGFGFV +    EA + V  L+
Sbjct: 234 KNIDAEVTDEEFRQLFEQFGNVTSAVIQRDEEGRSKGFGFVNFEKHEEAQKGVESLH 290


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