BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037430
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]   135   3e-30
ref|XP_003588887.1| Pentatricopeptide repeat-containing protein ...   132   4e-29
ref|XP_002527042.1| pentatricopeptide repeat-containing protein,...   131   5e-29
ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containi...   124   6e-27

>ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  135 bits (340), Expect = 3e-30
 Identities = 65/91 (71%), Positives = 75/91 (82%)
 Frame = -3

Query: 275 VFDEMPERDVPCWNAVMSCHYHDGQWEKALELFERMKGFGFLPDSVSYTTAISSCARLLD 96
           +FDEMPERDV  WN V+SC+Y DGQ EKALELFE MK  GF PDSV+ TT ISSCARLLD
Sbjct: 163 LFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLD 222

Query: 95  LEKGKDIHKEMLSVGFPLDNFVNAALVDMYG 3
           LE+GK+IH E++  GF LD FV++ALVDMYG
Sbjct: 223 LERGKEIHMELVRSGFALDGFVSSALVDMYG 253



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/90 (35%), Positives = 56/90 (62%)
 Frame = -3

Query: 275 VFDEMPERDVPCWNAVMSCHYHDGQWEKALELFERMKGFGFLPDSVSYTTAISSCARLLD 96
           VF  MP+ +V  WN ++S +   G + +AL +F  M+  G  PD++++T+ + +C++L  
Sbjct: 365 VFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAV 424

Query: 95  LEKGKDIHKEMLSVGFPLDNFVNAALVDMY 6
           LEKGK+IH  ++     ++  V  AL+DMY
Sbjct: 425 LEKGKEIHNFIIESKLEINEVVMGALLDMY 454



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/90 (30%), Positives = 54/90 (60%)
 Frame = -3

Query: 275 VFDEMPERDVPCWNAVMSCHYHDGQWEKALELFERMKGFGFLPDSVSYTTAISSCARLLD 96
           VF+++  ++V  WN++++ +   G  +  +ELF RM   G  P   + ++ + +C+R ++
Sbjct: 264 VFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVN 323

Query: 95  LEKGKDIHKEMLSVGFPLDNFVNAALVDMY 6
           L+ GK IH  ++      D FVN++L+D+Y
Sbjct: 324 LQLGKFIHGYIIRNRVEADIFVNSSLIDLY 353


>emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  135 bits (340), Expect = 3e-30
 Identities = 65/91 (71%), Positives = 75/91 (82%)
 Frame = -3

Query: 275 VFDEMPERDVPCWNAVMSCHYHDGQWEKALELFERMKGFGFLPDSVSYTTAISSCARLLD 96
           +FDEMPERDV  WN V+SC+Y DGQ EKALELFE MK  GF PDSV+ TT ISSCARLLD
Sbjct: 355 LFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLD 414

Query: 95  LEKGKDIHKEMLSVGFPLDNFVNAALVDMYG 3
           LE+GK+IH E++  GF LD FV++ALVDMYG
Sbjct: 415 LERGKEIHMELVRSGFALDGFVSSALVDMYG 445



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/90 (35%), Positives = 56/90 (62%)
 Frame = -3

Query: 275 VFDEMPERDVPCWNAVMSCHYHDGQWEKALELFERMKGFGFLPDSVSYTTAISSCARLLD 96
           VF  MP+ +V  WN ++S +   G + +AL +F  M+  G  PD++++T+ + +C++L  
Sbjct: 557 VFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAV 616

Query: 95  LEKGKDIHKEMLSVGFPLDNFVNAALVDMY 6
           LEKGK+IH  ++     ++  V  AL+DMY
Sbjct: 617 LEKGKEIHNFIIESKLEINEVVMGALLDMY 646



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/90 (30%), Positives = 54/90 (60%)
 Frame = -3

Query: 275 VFDEMPERDVPCWNAVMSCHYHDGQWEKALELFERMKGFGFLPDSVSYTTAISSCARLLD 96
           VF+++  ++V  WN++++ +   G  +  +ELF RM   G  P   + ++ + +C+R ++
Sbjct: 456 VFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVN 515

Query: 95  LEKGKDIHKEMLSVGFPLDNFVNAALVDMY 6
           L+ GK IH  ++      D FVN++L+D+Y
Sbjct: 516 LQLGKFIHGYIIRNRVEADIFVNSSLIDLY 545


>ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477935|gb|AES59138.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 697

 Score =  132 bits (331), Expect = 4e-29
 Identities = 58/91 (63%), Positives = 78/91 (85%)
 Frame = -3

Query: 275 VFDEMPERDVPCWNAVMSCHYHDGQWEKALELFERMKGFGFLPDSVSYTTAISSCARLLD 96
           +FDEMP++DV CWN V+SC+Y  G++E+AL  F  M+ FGF PDSV+ TTAISSCARLLD
Sbjct: 163 LFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLD 222

Query: 95  LEKGKDIHKEMLSVGFPLDNFVNAALVDMYG 3
           L++G++IHKE+++ GF +D+FV+AALVDMYG
Sbjct: 223 LDRGREIHKELVNSGFRMDSFVSAALVDMYG 253



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/90 (32%), Positives = 52/90 (57%)
 Frame = -3

Query: 275 VFDEMPERDVPCWNAVMSCHYHDGQWEKALELFERMKGFGFLPDSVSYTTAISSCARLLD 96
           +F  MP+     WN ++S +  +G+   AL LF  M      PD++++T+ +++C++L  
Sbjct: 365 IFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAA 424

Query: 95  LEKGKDIHKEMLSVGFPLDNFVNAALVDMY 6
           LEKG++IH  ++      +  V  AL+DMY
Sbjct: 425 LEKGREIHNLIVERNLGNNEVVMGALLDMY 454



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/90 (28%), Positives = 52/90 (57%)
 Frame = -3

Query: 275 VFDEMPERDVPCWNAVMSCHYHDGQWEKALELFERMKGFGFLPDSVSYTTAISSCARLLD 96
           VF++MP + V  WN++++ +   G     ++LF+RM   G  P   + T+ + +C++   
Sbjct: 264 VFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQ 323

Query: 95  LEKGKDIHKEMLSVGFPLDNFVNAALVDMY 6
           L +GK +H  ++      D F+N++L+D+Y
Sbjct: 324 LLEGKFVHGYIIRNRIQPDIFLNSSLMDLY 353


>ref|XP_002527042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533604|gb|EEF35342.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 520

 Score =  131 bits (330), Expect = 5e-29
 Identities = 60/91 (65%), Positives = 75/91 (82%)
 Frame = -3

Query: 275 VFDEMPERDVPCWNAVMSCHYHDGQWEKALELFERMKGFGFLPDSVSYTTAISSCARLLD 96
           +FDEMPERDV CWN V+SC+Y DG+ EKALE+F +M+  GF P+SV+ TT ISSCARLLD
Sbjct: 87  LFDEMPERDVACWNTVISCYYQDGKAEKALEMFGKMRDSGFEPNSVTLTTVISSCARLLD 146

Query: 95  LEKGKDIHKEMLSVGFPLDNFVNAALVDMYG 3
           LE+GK+IH+E++  G  LD FV +ALVDMYG
Sbjct: 147 LERGKEIHREVMQNGMVLDGFVGSALVDMYG 177



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/90 (34%), Positives = 56/90 (62%)
 Frame = -3

Query: 275 VFDEMPERDVPCWNAVMSCHYHDGQWEKALELFERMKGFGFLPDSVSYTTAISSCARLLD 96
           +F  +P+ +V  WN ++S +   G + KAL++++ MK     PD+V++++ +S+C++L  
Sbjct: 289 IFYMLPKANVVLWNVMISGYVTIGDYVKALDMYDEMKIASVKPDAVTFSSILSACSQLAA 348

Query: 95  LEKGKDIHKEMLSVGFPLDNFVNAALVDMY 6
           LEKGK+IH  +       +  V  AL+DMY
Sbjct: 349 LEKGKEIHNCITKNDLETNEIVMGALLDMY 378


>ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  124 bits (312), Expect = 6e-27
 Identities = 55/91 (60%), Positives = 76/91 (83%)
 Frame = -3

Query: 275 VFDEMPERDVPCWNAVMSCHYHDGQWEKALELFERMKGFGFLPDSVSYTTAISSCARLLD 96
           +F+EMPE+DV CWN V+SC+Y  G +++ALE F  M+ FGF P+SV+ TTAISSCARLLD
Sbjct: 163 LFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLD 222

Query: 95  LEKGKDIHKEMLSVGFPLDNFVNAALVDMYG 3
           L +G +IH+E+++ GF LD+F+++ALVDMYG
Sbjct: 223 LNRGMEIHEELINSGFLLDSFISSALVDMYG 253



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/90 (32%), Positives = 55/90 (61%)
 Frame = -3

Query: 275 VFDEMPERDVPCWNAVMSCHYHDGQWEKALELFERMKGFGFLPDSVSYTTAISSCARLLD 96
           +F  +P+  V  WN ++S +  +G+  +AL LF  M+     PD++++T+ +++C++L  
Sbjct: 365 IFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAA 424

Query: 95  LEKGKDIHKEMLSVGFPLDNFVNAALVDMY 6
           LEKG++IH  ++      +  V  AL+DMY
Sbjct: 425 LEKGEEIHNLIIEKKLDNNEVVMGALLDMY 454



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/92 (33%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
 Frame = -3

Query: 275 VFDEMPER-DVPCWNAVMSCHYHDGQWEKALELFERMKGFGFL-PDSVSYTTAISSCARL 102
           VFD M    ++  WN +M+ +  +  + +ALELFE++  + +L PDS +Y + + +C  L
Sbjct: 60  VFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGL 119

Query: 101 LDLEKGKDIHKEMLSVGFPLDNFVNAALVDMY 6
                GK IH  ++  G  +D  V ++LV MY
Sbjct: 120 YKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMY 151



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/90 (31%), Positives = 51/90 (56%)
 Frame = -3

Query: 275 VFDEMPERDVPCWNAVMSCHYHDGQWEKALELFERMKGFGFLPDSVSYTTAISSCARLLD 96
           VF++MP++ V  WN+++S +   G     ++LF+RM   G  P   + ++ I  C+R   
Sbjct: 264 VFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSAR 323

Query: 95  LEKGKDIHKEMLSVGFPLDNFVNAALVDMY 6
           L +GK +H   +      D F+N++L+D+Y
Sbjct: 324 LLEGKFVHGYTIRNRIQSDVFINSSLMDLY 353