BLASTX nr result

ID: Bupleurum21_contig00037423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037423
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626920.1| GRF zinc finger containing protein [Medicago...    58   9e-07
ref|XP_003612076.1| GRF zinc finger containing protein [Medicago...    56   3e-06
ref|XP_003620005.1| GRF zinc finger containing protein [Medicago...    56   3e-06
ref|XP_003593148.1| GRF zinc finger containing protein [Medicago...    56   3e-06
ref|XP_003595157.1| GRF zinc finger containing protein [Medicago...    54   1e-05

>ref|XP_003626920.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355520942|gb|AET01396.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 116

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/87 (36%), Positives = 39/87 (44%)
 Frame = +3

Query: 105 RIVCWCGKLAILRTSWTDANPGRRFWGCVNYMVSEXXXXXXXXXXXXKIDDS*FELQEDR 284
           ++VC+CG  + L TSWTD NPGRRF GC  Y V                           
Sbjct: 19  KLVCYCGVDSPLVTSWTDENPGRRFHGCGRYFV--------------------------- 51

Query: 285 SKACNFHTWMDPPMCQRSRCIIPGLLR 365
            + CNF  W DP +  R + II  LLR
Sbjct: 52  GRKCNFFRWYDPEVPDRQKKIIRALLR 78


>ref|XP_003612076.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355513411|gb|AES95034.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 116

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/87 (33%), Positives = 41/87 (47%)
 Frame = +3

Query: 105 RIVCWCGKLAILRTSWTDANPGRRFWGCVNYMVSEXXXXXXXXXXXXKIDDS*FELQEDR 284
           R+VC+CG  + L T+WTD NPGRRF GC  Y                            +
Sbjct: 20  RLVCYCGVESPLVTAWTDENPGRRFHGCGKYF---------------------------Q 52

Query: 285 SKACNFHTWMDPPMCQRSRCIIPGLLR 365
            + C+F  W DP + +R + +I GLL+
Sbjct: 53  RRKCSFFRWFDPEVPERQKKLIRGLLK 79


>ref|XP_003620005.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355495020|gb|AES76223.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 115

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/87 (34%), Positives = 41/87 (47%)
 Frame = +3

Query: 105 RIVCWCGKLAILRTSWTDANPGRRFWGCVNYMVSEXXXXXXXXXXXXKIDDS*FELQEDR 284
           ++VC+CG  + L T+WTD NPGRRF GC  Y                            +
Sbjct: 21  KLVCYCGVDSPLVTAWTDENPGRRFHGCGKYW---------------------------Q 53

Query: 285 SKACNFHTWMDPPMCQRSRCIIPGLLR 365
            + C+F  W DP + QR + II GLL+
Sbjct: 54  RRKCSFFRWFDPEVPQRQKKIIRGLLK 80


>ref|XP_003593148.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355482196|gb|AES63399.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 116

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 29/87 (33%), Positives = 41/87 (47%)
 Frame = +3

Query: 105 RIVCWCGKLAILRTSWTDANPGRRFWGCVNYMVSEXXXXXXXXXXXXKIDDS*FELQEDR 284
           R+VC+CG  + L T+WTD NPGRRF GC  Y                            +
Sbjct: 20  RLVCYCGVESPLVTAWTDENPGRRFHGCGKYF---------------------------Q 52

Query: 285 SKACNFHTWMDPPMCQRSRCIIPGLLR 365
            + C+F  W DP + +R + +I GLL+
Sbjct: 53  RRKCSFFRWFDPEVPERRKKLIRGLLK 79


>ref|XP_003595157.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355484205|gb|AES65408.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 106

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 33/90 (36%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
 Frame = +3

Query: 99  HR-RIVCWCGKLAILRTSWTDANPGRRFWGCVNYMVSEXXXXXXXXXXXXKIDDS*FELQ 275
           HR ++VC+CG  + L TSWTD NPGRRF GC    V                        
Sbjct: 16  HRTKLVCYCGVDSPLVTSWTDENPGRRFHGCGRDFV------------------------ 51

Query: 276 EDRSKACNFHTWMDPPMCQRSRCIIPGLLR 365
               + CNF  W DP +  R + II  LLR
Sbjct: 52  ---GRKCNFFRWYDPEVPDRQKKIIRALLR 78


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