BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037403
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520500.1| pentatricopeptide repeat-containing protein,...   169   2e-40
emb|CBI16054.3| unnamed protein product [Vitis vinifera]              169   3e-40
ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containi...   169   3e-40
ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|NP_190263.1| pentatricopeptide repeat-containing protein [Ar...   159   3e-37

>ref|XP_002520500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540342|gb|EEF41913.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 414

 Score =  169 bits (429), Expect = 2e-40
 Identities = 81/134 (60%), Positives = 103/134 (76%)
 Frame = -2

Query: 404 NYTIQSLCQQGNLKQALQVLAQEPNPNIQTFELLILTCSLKNSFFDAQIVHRHLIANGYD 225
           N  IQSLC+QGNLKQAL +L  EP+P   T+ELL+L+C+ +NSF DAQ VH+HL+ NG+D
Sbjct: 44  NKLIQSLCKQGNLKQALNLLCNEPDPAQHTYELLLLSCTHQNSFLDAQFVHQHLLDNGFD 103

Query: 224 QDTFLGTKLINMYFELGVVESAREVFDKMSERSVFVWNAMFRGLVLVGYGDEVLNLYRRM 45
           QD FL TKLINMY   G +++AR+VFDK   R+++V+NA+FR L LVG G+EVL LYRRM
Sbjct: 104 QDPFLATKLINMYSSFGSIDNARKVFDKTRSRTLYVYNALFRALTLVGNGEEVLRLYRRM 163

Query: 44  NDDGGFSDSFSYNY 3
           N  G  SD F+Y Y
Sbjct: 164 NSIGMPSDRFTYTY 177



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/107 (24%), Positives = 55/107 (51%)
 Frame = -2

Query: 329 PNIQTFELLILTCSLKNSFFDAQIVHRHLIANGYDQDTFLGTKLINMYFELGVVESAREV 150
           PN  T   ++  C+   +    +++H +++  G D    + + L+ MY   G ++ A+ V
Sbjct: 277 PNSVTMVSVLQACAALAALEQGKLLHGYILRRGLDSILPVISSLVTMYARCGKLQLAQHV 336

Query: 149 FDKMSERSVFVWNAMFRGLVLVGYGDEVLNLYRRMNDDGGFSDSFSY 9
           FD+M +R V  WN++     + G+G + + +++ M  +G F    S+
Sbjct: 337 FDQMDKRDVVSWNSLISSYGVHGFGKKAIQIFKDMTRNGVFPSPISF 383


>emb|CBI16054.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score =  169 bits (427), Expect = 3e-40
 Identities = 90/171 (52%), Positives = 112/171 (65%), Gaps = 18/171 (10%)
 Frame = -2

Query: 461 HLIRLFTHPSRIHHIPKC------------------KNYTIQSLCQQGNLKQALQVLAQE 336
           HL + F  P+ I   P+C                   N  IQSLC+QGNL QALQVL+QE
Sbjct: 14  HLPKPFHKPTAISPKPQCCLALRPSTTTRSNGDSNNNNPLIQSLCKQGNLNQALQVLSQE 73

Query: 335 PNPNIQTFELLILTCSLKNSFFDAQIVHRHLIANGYDQDTFLGTKLINMYFELGVVESAR 156
           PNP   T+ELLIL+C+ +NS      +HRHLI +G DQD FL TKLINMY EL  +++AR
Sbjct: 74  PNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNAR 133

Query: 155 EVFDKMSERSVFVWNAMFRGLVLVGYGDEVLNLYRRMNDDGGFSDSFSYNY 3
           +VFDK  +R+++VWNA+FR L L GYG EVL+LYRRMN  G  SD F+Y Y
Sbjct: 134 KVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTY 184


>ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score =  169 bits (427), Expect = 3e-40
 Identities = 90/171 (52%), Positives = 112/171 (65%), Gaps = 18/171 (10%)
 Frame = -2

Query: 461 HLIRLFTHPSRIHHIPKC------------------KNYTIQSLCQQGNLKQALQVLAQE 336
           HL + F  P+ I   P+C                   N  IQSLC+QGNL QALQVL+QE
Sbjct: 14  HLPKPFHKPTAISPKPQCCLALRPSTTTRSNGDSNNNNPLIQSLCKQGNLNQALQVLSQE 73

Query: 335 PNPNIQTFELLILTCSLKNSFFDAQIVHRHLIANGYDQDTFLGTKLINMYFELGVVESAR 156
           PNP   T+ELLIL+C+ +NS      +HRHLI +G DQD FL TKLINMY EL  +++AR
Sbjct: 74  PNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNAR 133

Query: 155 EVFDKMSERSVFVWNAMFRGLVLVGYGDEVLNLYRRMNDDGGFSDSFSYNY 3
           +VFDK  +R+++VWNA+FR L L GYG EVL+LYRRMN  G  SD F+Y Y
Sbjct: 134 KVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTY 184


>ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|222849824|gb|EEE87371.1|
           predicted protein [Populus trichocarpa]
          Length = 650

 Score =  166 bits (420), Expect = 2e-39
 Identities = 80/134 (59%), Positives = 103/134 (76%)
 Frame = -2

Query: 404 NYTIQSLCQQGNLKQALQVLAQEPNPNIQTFELLILTCSLKNSFFDAQIVHRHLIANGYD 225
           N  IQSLC+QGNL QAL++L+ EPNP   T+ELLIL+C+ +NS  DAQ VHRHL+ NG+D
Sbjct: 43  NKLIQSLCKQGNLTQALELLSLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLENGFD 102

Query: 224 QDTFLGTKLINMYFELGVVESAREVFDKMSERSVFVWNAMFRGLVLVGYGDEVLNLYRRM 45
           QD FL TKLINMY     +++AR+VFDK   R+++V+NA+FR L L G+G+EVLN+YRRM
Sbjct: 103 QDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRM 162

Query: 44  NDDGGFSDSFSYNY 3
           N  G  SD F+Y Y
Sbjct: 163 NSIGIPSDRFTYTY 176



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/112 (24%), Positives = 56/112 (50%)
 Frame = -2

Query: 368 LKQALQVLAQEPNPNIQTFELLILTCSLKNSFFDAQIVHRHLIANGYDQDTFLGTKLINM 189
           L + L +  Q+  PN  T   ++  C+   +    +++H +++  G D    + + L+ M
Sbjct: 263 LFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTM 322

Query: 188 YFELGVVESAREVFDKMSERSVFVWNAMFRGLVLVGYGDEVLNLYRRMNDDG 33
           Y   G +E  + VFD+M +R V  WN++     + G+G + + ++  M  +G
Sbjct: 323 YARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNG 374


>ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g46790, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
           gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis
           thaliana] gi|110741961|dbj|BAE98921.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332644684|gb|AEE78205.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  159 bits (401), Expect = 3e-37
 Identities = 77/134 (57%), Positives = 101/134 (75%)
 Frame = -2

Query: 404 NYTIQSLCQQGNLKQALQVLAQEPNPNIQTFELLILTCSLKNSFFDAQIVHRHLIANGYD 225
           N  IQSLC++G LKQA++VL+QE +P+ QT+ELLIL C  ++S  DA  VHRH++ NG D
Sbjct: 50  NQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSD 109

Query: 224 QDTFLGTKLINMYFELGVVESAREVFDKMSERSVFVWNAMFRGLVLVGYGDEVLNLYRRM 45
           QD FL TKLI MY +LG V+ AR+VFDK  +R+++VWNA+FR L L G+G+EVL LY +M
Sbjct: 110 QDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKM 169

Query: 44  NDDGGFSDSFSYNY 3
           N  G  SD F+Y Y
Sbjct: 170 NRIGVESDRFTYTY 183



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/103 (24%), Positives = 53/103 (51%)
 Frame = -2

Query: 341 QEPNPNIQTFELLILTCSLKNSFFDAQIVHRHLIANGYDQDTFLGTKLINMYFELGVVES 162
           ++ +PN  T   ++  C+   +    +++H +++  G D    + + L+ MY   G +E 
Sbjct: 279 KDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEV 338

Query: 161 AREVFDKMSERSVFVWNAMFRGLVLVGYGDEVLNLYRRMNDDG 33
            + VFD+M +R V  WN++     + GYG + + ++  M  +G
Sbjct: 339 GQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANG 381