BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037396
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    95   5e-18
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...    87   1e-15
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]               87   2e-15
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            87   2e-15
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    87   2e-15

>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
 Frame = +2

Query: 2   GDIRWNQGIRDFRLCVDNLGLSDLSCSGEKLTWWNSSNNNPIYRKLDRVMINGAWLATYP 181
           G  R  +G+ +FR C+    +SDL   G   TWWN+  NNPI +K+DR+++N +WL   P
Sbjct: 156 GGSRITRGMEEFRECLLTSNISDLPFRGNHYTWWNNQENNPIAKKIDRILVNDSWLIASP 215

Query: 182 MAHACFQSRGLSDHCPALISTGLQWAVNKKSFQMFLHLMNNADFLPLVEEAWS-FSSSGD 358
           +++  F +   SDHCP+ ++   Q     K F++   LM++ +F+  +   W   +  G 
Sbjct: 216 LSYGSFCAMEFSDHCPSCVNISNQSGGRNKPFKLSNFLMHHPEFIEKIRVTWDRLAYQGS 275

Query: 359 PWFVLTNKLK 388
             F L+ K K
Sbjct: 276 AMFTLSKKSK 285


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 48/124 (38%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
 Frame = +2

Query: 20  QGIRDFRLCVDNLGLSDLSCSGEKLTWWNSSNNNPIYRKLDRVMINGAWLATYPMAHACF 199
           +G+ D + C+ +  LSDL   G   TW N   +NPI RKLDR + NG W A +P A A F
Sbjct: 163 RGMEDLQCCLRDSQLSDLPSRGVFFTWSNHQQDNPILRKLDRALANGEWFAVFPSALAVF 222

Query: 200 QSRGLSDHCPALISTGLQWAVNKKSFQMFLHLMNNADFLPLVEEAWSFSS-SGDPWFVLT 376
              G SDH P +I    Q   +KKSF+ F  L ++  +L  +  AW  ++  G   F L 
Sbjct: 223 DPPGDSDHAPCIILIDNQPPPSKKSFKYFSFLSSHPSYLAALSTAWEANTLVGSHMFSLR 282

Query: 377 NKLK 388
             LK
Sbjct: 283 QHLK 286


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 48/124 (38%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
 Frame = +2

Query: 20  QGIRDFRLCVDNLGLSDLSCSGEKLTWWNSSNNNPIYRKLDRVMINGAWLATYPMAHACF 199
           +G+ D + C+ +  LSDL   G   TW N   +NPI RKLDR + NG W A +P A A F
Sbjct: 206 RGMEDLQCCLRDSQLSDLPSRGVFFTWSNHQQDNPILRKLDRALANGEWFAVFPSALAVF 265

Query: 200 QSRGLSDHCPALISTGLQWAVNKKSFQMFLHLMNNADFLPLVEEAWSFSS-SGDPWFVLT 376
              G SDH P +I    Q   +KKSF+ F  L ++  +L  +  AW  ++  G   F L 
Sbjct: 266 DPPGDSDHAPCIILIDNQPPPSKKSFKYFSFLSSHPSYLAALSTAWEENTLVGSHMFSLR 325

Query: 377 NKLK 388
             LK
Sbjct: 326 QHLK 329


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = +2

Query: 26  IRDFRLCVDNLGLSDLSCSGEKLTWWNSSNNNPIYRKLDRVMINGAWLATYPMAHACFQS 205
           +RDF  C+  + LSDL   G   TWWN S+  PI +KLDR++ N +W   YP +H  F +
Sbjct: 26  MRDFGSCLSEMELSDLVFKGNSFTWWNKSSIRPIAKKLDRILANDSWCNLYPSSHGLFGN 85

Query: 206 RGLSDHCPALISTGLQWAVNKKSFQMFLHLMNNADFLPLVEEAW-SFSSSGDPWFVLTNK 382
              SDH    +         K+ F+ F  L+ N DFL +V + W S +  G   + ++ K
Sbjct: 86  LDFSDHVSCGVVLEANGISAKRPFKFFNFLLKNEDFLNVVMDNWFSTNVVGSSMYRVSKK 145

Query: 383 LK 388
           LK
Sbjct: 146 LK 147


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = +2

Query: 26  IRDFRLCVDNLGLSDLSCSGEKLTWWNSSNNNPIYRKLDRVMINGAWLATYPMAHACFQS 205
           +RDF  C+  + LSDL   G   TWWN S+  PI +KLDR++ N +W   YP +H  F +
Sbjct: 26  MRDFGSCLSEMELSDLVFKGNSFTWWNKSSIRPIAKKLDRILANDSWCNLYPSSHGLFGN 85

Query: 206 RGLSDHCPALISTGLQWAVNKKSFQMFLHLMNNADFLPLVEEAW-SFSSSGDPWFVLTNK 382
              SDH    +         K+ F+ F  L+ N DFL +V + W S +  G   + ++ K
Sbjct: 86  LDFSDHVSCGVVLEANGISAKRPFKFFNFLLKNEDFLNVVMDNWFSTNVVGSSMYRVSKK 145

Query: 383 LK 388
           LK
Sbjct: 146 LK 147