BLASTX nr result

ID: Bupleurum21_contig00037395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037395
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   164   7e-39
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   164   7e-39
emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]         164   7e-39
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         164   7e-39
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   164   7e-39

>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  164 bits (415), Expect = 7e-39
 Identities = 83/151 (54%), Positives = 114/151 (75%), Gaps = 1/151 (0%)
 Frame = +3

Query: 15  LTVNEIKALRTTRMKDKTALYLLYQAVDESGFEKIASATNSKTAWDILEKSYKGADRVKQ 194
           L+  +   LR +R +DK AL L+YQ +DE  FEK+  AT++K AW+ L  SYKGAD+VK+
Sbjct: 51  LSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKK 110

Query: 195 VRLQTLRGELEAMRMKDSG-VSEYITRVQTVVNQLRRNGETLTDTRVVEKILRSLTAKFE 371
           VRLQTLRGE EA++MK+   VS+Y +RV TV N L+RNGE L D R++EK+LRSL  KFE
Sbjct: 111 VRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFE 170

Query: 372 NIVCAIEESKNLAEMTIDDVVSSLEAHEQRK 464
           +IV  IEE+K+L  MTI+ ++ SL+A+E++K
Sbjct: 171 HIVTVIEETKDLEAMTIEQLLGSLQAYEEKK 201


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
           polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  164 bits (415), Expect = 7e-39
 Identities = 83/151 (54%), Positives = 114/151 (75%), Gaps = 1/151 (0%)
 Frame = +3

Query: 15  LTVNEIKALRTTRMKDKTALYLLYQAVDESGFEKIASATNSKTAWDILEKSYKGADRVKQ 194
           L+  +   LR +R +DK AL L+YQ +DE  FEK+  AT++K AW+ L  SYKGAD+VK+
Sbjct: 51  LSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKK 110

Query: 195 VRLQTLRGELEAMRMKDSG-VSEYITRVQTVVNQLRRNGETLTDTRVVEKILRSLTAKFE 371
           VRLQTLRGE EA++MK+   VS+Y +RV TV N L+RNGE L D R++EK+LRSL  KFE
Sbjct: 111 VRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFE 170

Query: 372 NIVCAIEESKNLAEMTIDDVVSSLEAHEQRK 464
           +IV  IEE+K+L  MTI+ ++ SL+A+E++K
Sbjct: 171 HIVTVIEETKDLEAMTIEQLLGSLQAYEEKK 201


>emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 544

 Score =  164 bits (415), Expect = 7e-39
 Identities = 83/151 (54%), Positives = 114/151 (75%), Gaps = 1/151 (0%)
 Frame = +3

Query: 15  LTVNEIKALRTTRMKDKTALYLLYQAVDESGFEKIASATNSKTAWDILEKSYKGADRVKQ 194
           L+  +   LR +R +DK AL L+YQ +DE  FEK+  AT++K AW+ L  SYKGAD+VK+
Sbjct: 67  LSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKK 126

Query: 195 VRLQTLRGELEAMRMKDSG-VSEYITRVQTVVNQLRRNGETLTDTRVVEKILRSLTAKFE 371
           VRLQTLRGE EA++MK+   VS+Y +RV TV N L+RNGE L D R++EK+LRSL  KFE
Sbjct: 127 VRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFE 186

Query: 372 NIVCAIEESKNLAEMTIDDVVSSLEAHEQRK 464
           +IV  IEE+K+L  MTI+ ++ SL+A+E++K
Sbjct: 187 HIVTVIEETKDLEAMTIEQLLGSLQAYEEKK 217


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  164 bits (415), Expect = 7e-39
 Identities = 83/151 (54%), Positives = 114/151 (75%), Gaps = 1/151 (0%)
 Frame = +3

Query: 15  LTVNEIKALRTTRMKDKTALYLLYQAVDESGFEKIASATNSKTAWDILEKSYKGADRVKQ 194
           L+  +   LR +R +DK AL L+YQ +DE  FEK+  AT++K AW+ L  SYKGAD+VK+
Sbjct: 51  LSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKK 110

Query: 195 VRLQTLRGELEAMRMKDSG-VSEYITRVQTVVNQLRRNGETLTDTRVVEKILRSLTAKFE 371
           VRLQTLRGE EA++MK+   VS+Y +RV TV N L+RNGE L D R++EK+LRSL  KFE
Sbjct: 111 VRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFE 170

Query: 372 NIVCAIEESKNLAEMTIDDVVSSLEAHEQRK 464
           +IV  IEE+K+L  MTI+ ++ SL+A+E++K
Sbjct: 171 HIVTVIEETKDLEAMTIEQLLGSLQAYEEKK 201


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis
           thaliana]
          Length = 1272

 Score =  164 bits (415), Expect = 7e-39
 Identities = 83/151 (54%), Positives = 114/151 (75%), Gaps = 1/151 (0%)
 Frame = +3

Query: 15  LTVNEIKALRTTRMKDKTALYLLYQAVDESGFEKIASATNSKTAWDILEKSYKGADRVKQ 194
           L+  +   LR +R +DK AL L+YQ +DE  FEK+  AT++K AW+ L  SYKGAD+VK+
Sbjct: 51  LSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKK 110

Query: 195 VRLQTLRGELEAMRMKDSG-VSEYITRVQTVVNQLRRNGETLTDTRVVEKILRSLTAKFE 371
           VRLQTLRGE EA++MK+   VS+Y +RV TV N L+RNGE L D R++EK+LRSL  KFE
Sbjct: 111 VRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFE 170

Query: 372 NIVCAIEESKNLAEMTIDDVVSSLEAHEQRK 464
           +IV  IEE+K+L  MTI+ ++ SL+A+E++K
Sbjct: 171 HIVTVIEETKDLEAMTIEQLLGSLQAYEEKK 201


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