BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037389
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT77305.1| putative polyprotein [Oryza sativa Japonica Group]     137   1e-30
gb|ABF97034.1| retrotransposon protein, putative, Ty3-gypsy subc...   135   5e-30
gb|ABA96443.2| retrotransposon protein, putative, Ty3-gypsy subc...   134   8e-30
gb|AAL82662.1|AC092387_10 retrotransposon protein, putative, Ty3...   133   1e-29
emb|CAD39384.2| OSJNBb0016B03.14 [Oryza sativa Japonica Group]        133   1e-29

>gb|AAT77305.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 986

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/115 (58%), Positives = 83/115 (72%)
 Frame = -3

Query: 346 ITAGKFLGYLVSHRGIEANPEKIQAVLSMQPPKTQKEIQILTGRLAALRRFIAKLADKSL 167
           + AGK LG+LVS RGIEANPEKI A+  M+PP +  E+Q LTGR+AAL RF++K A++ L
Sbjct: 206 VRAGKLLGFLVSERGIEANPEKIDAIQQMKPPSSVHEVQKLTGRIAALSRFLSKAAERGL 265

Query: 166 PFFETLRGASNSKSIQWSSECQQAFEELKQYLSTPPVLAVAKPEESLLLYLSAGP 2
           PFF+TLRGA       W+ ECQ AF+ELKQYL +PP L    P   LLLYL+A P
Sbjct: 266 PFFKTLRGAG---KFNWTPECQAAFDELKQYLQSPPALISPPPGSELLLYLAASP 317


>gb|ABF97034.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1908

 Score =  135 bits (339), Expect = 5e-30
 Identities = 66/115 (57%), Positives = 82/115 (71%)
 Frame = -3

Query: 346  ITAGKFLGYLVSHRGIEANPEKIQAVLSMQPPKTQKEIQILTGRLAALRRFIAKLADKSL 167
            + AGK LG+LVS RGIEANPEKI A+  M+PP +  E+Q L GR+AAL RF++K A++ L
Sbjct: 1102 VRAGKLLGFLVSERGIEANPEKIDAIQQMKPPSSVHEVQKLAGRIAALSRFLSKAAERGL 1161

Query: 166  PFFETLRGASNSKSIQWSSECQQAFEELKQYLSTPPVLAVAKPEESLLLYLSAGP 2
            PFF+TLRGA       W+ ECQ AF+ELKQYL +PP L    P   LLLYL+A P
Sbjct: 1162 PFFKTLRGAG---KFNWTPECQAAFDELKQYLQSPPALISPPPGSELLLYLAASP 1213


>gb|ABA96443.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1472

 Score =  134 bits (337), Expect = 8e-30
 Identities = 64/115 (55%), Positives = 82/115 (71%)
 Frame = -3

Query: 346  ITAGKFLGYLVSHRGIEANPEKIQAVLSMQPPKTQKEIQILTGRLAALRRFIAKLADKSL 167
            + AGK LG+LVS RGIEANPEKI A+  M+PP + +E+Q L GR+AA+ RF++K A++ L
Sbjct: 932  VRAGKLLGFLVSERGIEANPEKIDAIRQMKPPSSVREVQKLAGRIAAISRFLSKAAERGL 991

Query: 166  PFFETLRGASNSKSIQWSSECQQAFEELKQYLSTPPVLAVAKPEESLLLYLSAGP 2
            PFF+TLRGA       W+ ECQ AF+ELKQYL  PP L    P   +LLYL+A P
Sbjct: 992  PFFKTLRGAG---KFSWTPECQVAFDELKQYLQNPPTLVSPTPGSEMLLYLAASP 1043


>gb|AAL82662.1|AC092387_10 retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|20270061|gb|AAM18149.1|AC092172_9
            Putative gag-pol precursor [Oryza sativa Japonica Group]
            gi|31430891|gb|AAP52743.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1964

 Score =  133 bits (335), Expect = 1e-29
 Identities = 62/113 (54%), Positives = 87/113 (76%)
 Frame = -3

Query: 346  ITAGKFLGYLVSHRGIEANPEKIQAVLSMQPPKTQKEIQILTGRLAALRRFIAKLADKSL 167
            + +GK LG++VSHRGI+ANPEK+ A+L+M+PP TQK++Q LTG +AAL RF+++L ++ +
Sbjct: 1147 VPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGM 1206

Query: 166  PFFETLRGASNSKSIQWSSECQQAFEELKQYLSTPPVLAVAKPEESLLLYLSA 8
            PFF+ L+   N    QW  E Q+AFE+LKQ L+ PPVLA   P+E LLLY+SA
Sbjct: 1207 PFFKLLKKTDN---FQWGPEAQKAFEDLKQLLTKPPVLASPHPQEPLLLYVSA 1256


>emb|CAD39384.2| OSJNBb0016B03.14 [Oryza sativa Japonica Group]
          Length = 1323

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/115 (56%), Positives = 82/115 (71%)
 Frame = -3

Query: 346 ITAGKFLGYLVSHRGIEANPEKIQAVLSMQPPKTQKEIQILTGRLAALRRFIAKLADKSL 167
           + AGK LG+LVS RGIEANPEKI A+  M+PP +  E++ L GR+AAL RF++K A + L
Sbjct: 565 VRAGKLLGFLVSERGIEANPEKIDAIQQMKPPSSVHEVKKLVGRIAALSRFLSKAAKRGL 624

Query: 166 PFFETLRGASNSKSIQWSSECQQAFEELKQYLSTPPVLAVAKPEESLLLYLSAGP 2
           PFF+TLRGA       W+ ECQ+AF+ELKQYL +PP L    P   LLLYL+A P
Sbjct: 625 PFFKTLRGAG---KFNWTPECQEAFDELKQYLQSPPALISPTPGSELLLYLAASP 676