BLASTX nr result

ID: Bupleurum21_contig00037373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037373
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002863224.1| hypothetical protein ARALYDRAFT_497141 [Arab...   114   6e-29
ref|XP_002888392.1| NADH dehydrogenase ND2 [Arabidopsis lyrata s...    81   1e-13
ref|XP_002519774.1| NADH dehydrogenase, putative [Ricinus commun...    55   5e-06

>ref|XP_002863224.1| hypothetical protein ARALYDRAFT_497141 [Arabidopsis lyrata subsp.
           lyrata] gi|297309058|gb|EFH39483.1| hypothetical protein
           ARALYDRAFT_497141 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  114 bits (285), Expect(2) = 6e-29
 Identities = 51/56 (91%), Positives = 54/56 (96%)
 Frame = +2

Query: 179 WFSSFRDYEYNRSIRRQKDHPKMIISWLLRTNQIRWFYFSIFQICSYGTKIEKIEK 346
           WFSSFRDYE NRSIRRQKDHPKMIISWLLRTNQIRWF+FSIF+ CSYGTK+EKIEK
Sbjct: 139 WFSSFRDYECNRSIRRQKDHPKMIISWLLRTNQIRWFHFSIFRTCSYGTKVEKIEK 194



 Score = 38.1 bits (87), Expect(2) = 6e-29
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = +1

Query: 343 KNKSFTTTDEGFLEKLRI 396
           KN+SFTTTDEGFLEKLRI
Sbjct: 194 KNQSFTTTDEGFLEKLRI 211


>ref|XP_002888392.1| NADH dehydrogenase ND2 [Arabidopsis lyrata subsp. lyrata]
           gi|297334233|gb|EFH64651.1| NADH dehydrogenase ND2
           [Arabidopsis lyrata subsp. lyrata]
          Length = 425

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/49 (75%), Positives = 40/49 (81%), Gaps = 4/49 (8%)
 Frame = +2

Query: 173 HSW----FSSFRDYEYNRSIRRQKDHPKMIISWLLRTNQIRWFYFSIFQ 307
           H W    +   RDYE NRSIRRQKDHPKMIISWLLRTNQIRWF+FSIF+
Sbjct: 127 HQWTPDVYEGVRDYECNRSIRRQKDHPKMIISWLLRTNQIRWFHFSIFR 175


>ref|XP_002519774.1| NADH dehydrogenase, putative [Ricinus communis]
           gi|223541013|gb|EEF42570.1| NADH dehydrogenase, putative
           [Ricinus communis]
          Length = 161

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = +3

Query: 165 RCYIVGSHPSETTSIIGASVDKRITLR 245
           RCYIVGSHPS+TTS+IGASVDKRITLR
Sbjct: 135 RCYIVGSHPSKTTSVIGASVDKRITLR 161


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