BLASTX nr result

ID: Bupleurum21_contig00037368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037368
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327524.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40
ref|XP_002329012.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]   164   7e-39
emb|CBI28241.3| unnamed protein product [Vitis vinifera]              159   2e-37
ref|XP_003541477.1| PREDICTED: uncharacterized protein LOC100800...   155   4e-36

>ref|XP_002327524.1| predicted protein [Populus trichocarpa] gi|222836078|gb|EEE74499.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  169 bits (428), Expect = 2e-40
 Identities = 82/136 (60%), Positives = 106/136 (77%)
 Frame = -2

Query: 409 FPDTEVAFSHAVVDCLTSWGLEHKIFTLTLDATIANEAVQRNLRGLLSVMNPQVLNGQLI 230
           F D++ AF+ A+V CL+ W LE K+FTLTLD + +NE +  NLRGLLSV NP VL+GQL+
Sbjct: 207 FYDSDYAFNEAIVSCLSDWQLESKLFTLTLDQSFSNETIIGNLRGLLSVKNPFVLHGQLL 266

Query: 229 LGNCYARTLSCLAKDALGSMEYIIKKVRDSVKYVKTYRGNEERFLELKQKLQNPSSKSLA 50
            GNCYAR LS LA+DAL +   I+ ++R+SVKYVKT   ++E+F EL+Q+LQ PS+K L 
Sbjct: 267 KGNCYARVLSRLAQDALSATGDIVMRIRESVKYVKTSEAHDEKFTELRQQLQVPSTKDLI 326

Query: 49  IDDETKWNTTYHMLVA 2
           IDD+TKWNTTY MLVA
Sbjct: 327 IDDQTKWNTTYQMLVA 342


>ref|XP_002329012.1| predicted protein [Populus trichocarpa] gi|222839683|gb|EEE78006.1|
           predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  166 bits (419), Expect = 2e-39
 Identities = 81/136 (59%), Positives = 107/136 (78%)
 Frame = -2

Query: 409 FPDTEVAFSHAVVDCLTSWGLEHKIFTLTLDATIANEAVQRNLRGLLSVMNPQVLNGQLI 230
           F D++ AF+ AVV CL+ W L  K+FTLTLD + +NE V  NLRGLLSV NP VL+GQL+
Sbjct: 239 FYDSDYAFNQAVVSCLSDWHLRSKLFTLTLDQSFSNENVIGNLRGLLSVKNPFVLHGQLL 298

Query: 229 LGNCYARTLSCLAKDALGSMEYIIKKVRDSVKYVKTYRGNEERFLELKQKLQNPSSKSLA 50
            G+CYAR LS LA++AL +   I++++R+SVKYVKT   ++E+F EL+Q+LQ PS+K L 
Sbjct: 299 KGSCYARVLSHLAQEALSATGEIVRRIRESVKYVKTSEAHDEKFTELRQQLQVPSTKILI 358

Query: 49  IDDETKWNTTYHMLVA 2
           ID++TKWNTTYHMLVA
Sbjct: 359 IDNQTKWNTTYHMLVA 374


>emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]
          Length = 1045

 Score =  164 bits (415), Expect = 7e-39
 Identities = 77/135 (57%), Positives = 105/135 (77%)
 Frame = -2

Query: 406 PDTEVAFSHAVVDCLTSWGLEHKIFTLTLDATIANEAVQRNLRGLLSVMNPQVLNGQLIL 227
           P+++ AF+ AVV CL  W LE ++FT+TLD + ++E +  NLRG++SV NP + NGQL++
Sbjct: 593 PESDDAFAQAVVACLADWSLESRLFTITLDQSFSSETMMGNLRGVVSVKNPLIFNGQLLI 652

Query: 226 GNCYARTLSCLAKDALGSMEYIIKKVRDSVKYVKTYRGNEERFLELKQKLQNPSSKSLAI 47
            NC+AR LS LA+DALG+M   +KK+R+SVKYVKT   +EE+FLELK +LQ PS K+L I
Sbjct: 653 RNCFARVLSSLAQDALGAMTDTVKKIRESVKYVKTSDAHEEKFLELKHQLQVPSVKTLFI 712

Query: 46  DDETKWNTTYHMLVA 2
           +D TKWN+TYHML A
Sbjct: 713 NDYTKWNSTYHMLAA 727


>emb|CBI28241.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  159 bits (402), Expect = 2e-37
 Identities = 79/136 (58%), Positives = 102/136 (75%)
 Frame = -2

Query: 409 FPDTEVAFSHAVVDCLTSWGLEHKIFTLTLDATIANEAVQRNLRGLLSVMNPQVLNGQLI 230
           F D+E AFSHAV  CL+ W LE+K+F++T++  + NE     LR  LS+ NP +LNGQ +
Sbjct: 317 FTDSETAFSHAVAVCLSDWSLENKLFSITINQPL-NEIGIEYLRAQLSIKNPLLLNGQFL 375

Query: 229 LGNCYARTLSCLAKDALGSMEYIIKKVRDSVKYVKTYRGNEERFLELKQKLQNPSSKSLA 50
           +GNC ARTLS +A D LG+    IKK+RDSVKYVKT   +EE+FLELKQ+LQ PS+KSL 
Sbjct: 376 VGNCIARTLSSMALDVLGAGRETIKKIRDSVKYVKTSESHEEKFLELKQQLQVPSTKSLF 435

Query: 49  IDDETKWNTTYHMLVA 2
           +DD+ +WNTTY MLVA
Sbjct: 436 LDDQNQWNTTYEMLVA 451


>ref|XP_003541477.1| PREDICTED: uncharacterized protein LOC100800468 [Glycine max]
          Length = 1100

 Score =  155 bits (391), Expect = 4e-36
 Identities = 76/136 (55%), Positives = 101/136 (74%)
 Frame = -2

Query: 409  FPDTEVAFSHAVVDCLTSWGLEHKIFTLTLDATIANEAVQRNLRGLLSVMNPQVLNGQLI 230
            +P+++ A SHAV  C++ W LE K+F++T   +++ E V  NLR LL V NP +LNGQL+
Sbjct: 666  YPNSDSALSHAVAVCISDWNLEGKLFSITCGQSLS-EVVLGNLRPLLFVKNPLILNGQLL 724

Query: 229  LGNCYARTLSCLAKDALGSMEYIIKKVRDSVKYVKTYRGNEERFLELKQKLQNPSSKSLA 50
            +GNC ARTLS +A D L S+   +KK+RDSVKYVKT   +EE+FL+LK +LQ PS + L 
Sbjct: 725  IGNCIARTLSNVADDLLSSVHLTVKKIRDSVKYVKTSESHEEKFLDLKLQLQVPSERKLL 784

Query: 49   IDDETKWNTTYHMLVA 2
            IDD+TKWNTTY MLVA
Sbjct: 785  IDDQTKWNTTYQMLVA 800


Top