BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037349
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99221.1| polypepetide with reverse transcriptase and RNas...   152   2e-35
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...   152   4e-35
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   146   1e-33
emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]   145   3e-33
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]   143   1e-32

>dbj|BAD99221.1| polypepetide with reverse transcriptase and RNaseH domains [Petunia
           x hybrida]
          Length = 389

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/128 (55%), Positives = 93/128 (72%)
 Frame = -1

Query: 384 PGTAYTPLPINLKLLADEGELYSDPEHYRKMVGKLNFLTHTRPDLSYSVQTLSQFMQQPR 205
           P T  TPL  +LKL +  GEL  DP  YR++VGKLN+LTHTRPD+S++VQTLSQ MQ PR
Sbjct: 137 PRTVTTPLDPSLKLSSISGELLQDPTFYRRLVGKLNYLTHTRPDISFAVQTLSQHMQSPR 196

Query: 204 ITHLKALHHVLRYISHTIGQGILLNATDQLVLQSYSDSDWAACPNTRRSITGYILLLGNS 25
             HL+A +H LRYI +  G GI L++     L  + D+DWA+CP++RRSI+G+ L +G  
Sbjct: 197 SGHLEAAYHTLRYIRNNPGLGIFLSSEQSFQLTGFCDADWASCPDSRRSISGFFLTMGGC 256

Query: 24  PVSWKSKK 1
           P+SWKSKK
Sbjct: 257 PLSWKSKK 264


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/125 (57%), Positives = 92/125 (73%)
 Frame = -1

Query: 375  AYTPLPINLKLLADEGELYSDPEHYRKMVGKLNFLTHTRPDLSYSVQTLSQFMQQPRITH 196
            A+TPL  N  L +D+G L SDP+ YR++VG+L +L HTRP+LSYSV  L+QFMQ PR  H
Sbjct: 1255 AHTPLEQNHHLASDDGPLLSDPKPYRRLVGRLLYLLHTRPELSYSVHVLAQFMQNPREAH 1314

Query: 195  LKALHHVLRYISHTIGQGILLNATDQLVLQSYSDSDWAACPNTRRSITGYILLLGNSPVS 16
              A   V+RY+  + GQGILLNA   L L+ Y DSDW +CP TRRSI+ Y++LLG SP+S
Sbjct: 1315 FDAALRVVRYLKGSPGQGILLNADPDLTLEVYCDSDWQSCPLTRRSISAYVVLLGGSPIS 1374

Query: 15   WKSKK 1
            WK+KK
Sbjct: 1375 WKTKK 1379


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  146 bits (369), Expect = 1e-33
 Identities = 68/125 (54%), Positives = 93/125 (74%)
 Frame = -1

Query: 375  AYTPLPINLKLLADEGELYSDPEHYRKMVGKLNFLTHTRPDLSYSVQTLSQFMQQPRITH 196
            AYTPL  N  L +D+G L  DP+ +R++VG+L +L HTRP+LSYSV  LSQFMQ PR  H
Sbjct: 1245 AYTPLEQNHHLASDDGPLLQDPKPFRRLVGRLLYLLHTRPELSYSVHVLSQFMQAPREAH 1304

Query: 195  LKALHHVLRYISHTIGQGILLNATDQLVLQSYSDSDWAACPNTRRSITGYILLLGNSPVS 16
            L+A   ++RY+  + GQGILL++   L L+ Y DSD+ +CP TRRS++ Y++LLG SP+S
Sbjct: 1305 LEAAMRIVRYLKGSPGQGILLSSNKDLTLEVYCDSDFQSCPLTRRSLSAYVVLLGGSPIS 1364

Query: 15   WKSKK 1
            WK+KK
Sbjct: 1365 WKTKK 1369


>emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]
          Length = 1031

 Score =  145 bits (367), Expect = 3e-33
 Identities = 64/125 (51%), Positives = 98/125 (78%)
 Frame = -1

Query: 375  AYTPLPINLKLLADEGELYSDPEHYRKMVGKLNFLTHTRPDLSYSVQTLSQFMQQPRITH 196
            A TP+ +N++L  D+GEL +DP  YR+++GKL +LT TRP+L+YS+  L QF+ QPR  H
Sbjct: 766  AKTPMQLNMQLSQDDGELLTDPNMYRRLIGKLIYLTITRPNLTYSMNKLIQFLSQPRRPH 825

Query: 195  LKALHHVLRYISHTIGQGILLNATDQLVLQSYSDSDWAACPNTRRSITGYILLLGNSPVS 16
            L+A++ +L+YI  + G+GI  +A+  L L+++SDSDWAACP++R+S+TG+ + LG+S +S
Sbjct: 826  LQAVYRILQYIKGSPGKGIFFSASSSLQLKAFSDSDWAACPDSRKSVTGFCIFLGDSLIS 885

Query: 15   WKSKK 1
            WKSKK
Sbjct: 886  WKSKK 890


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score =  143 bits (361), Expect = 1e-32
 Identities = 69/122 (56%), Positives = 89/122 (72%)
 Frame = -1

Query: 366  PLPINLKLLADEGELYSDPEHYRKMVGKLNFLTHTRPDLSYSVQTLSQFMQQPRITHLKA 187
            P+  N +L    GEL S+PE YR++VG+L +L  TRPDL+YSV  LSQFM +PRI H +A
Sbjct: 935  PIEQNHRLXLANGELLSNPESYRRLVGRLIYLAVTRPDLAYSVHILSQFMXEPRIEHWEA 994

Query: 186  LHHVLRYISHTIGQGILLNATDQLVLQSYSDSDWAACPNTRRSITGYILLLGNSPVSWKS 7
               V+RY+  T GQGILL A   L LQ + DSDWAACP TRRS++G+++ LG SP+SWK+
Sbjct: 995  ALRVVRYLKGTPGQGILLRADSDLSLQGWCDSDWAACPVTRRSLSGWLVFLGQSPISWKT 1054

Query: 6    KK 1
            KK
Sbjct: 1055 KK 1056