BLASTX nr result

ID: Bupleurum21_contig00037325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037325
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN26356.1| unknown [Zea mays]                                     100   2e-19
ref|NP_001147988.1| transposon protein [Zea mays] gi|195615000|g...   100   2e-19
ref|XP_002329012.1| predicted protein [Populus trichocarpa] gi|2...    99   7e-19
ref|XP_002455637.1| hypothetical protein SORBIDRAFT_03g015311 [S...    98   9e-19
emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]    98   9e-19

>gb|ACN26356.1| unknown [Zea mays]
          Length = 510

 Score =  100 bits (248), Expect = 2e-19
 Identities = 51/113 (45%), Positives = 75/113 (66%), Gaps = 3/113 (2%)
 Frame = -2

Query: 485 PSLCKLGWSEFNEFVKTIETIQPLKSDLDNYLEEGCFISEDPRAFDALEWWKVNTLKYRI 306
           PS    G  +F+ ++  I++ QP K DL+ YLEE   ++   + FD L WWK+NTLK+  
Sbjct: 379 PSSTGDGLLDFDMYLSEIQSTQPAKCDLEQYLEES--LTPRIQEFDILNWWKLNTLKFPT 436

Query: 305 LSKMARDILVIPITTVASEATFSACG---RVIDTYRASLSSETVQVLLCGEDW 156
           LSKMARDIL IP++ V+S ++  + G   R++D YR+SL  ETV+ L+C +DW
Sbjct: 437 LSKMARDILAIPMSMVSSGSSIFSAGTGNRMLDDYRSSLRPETVEALVCAKDW 489


>ref|NP_001147988.1| transposon protein [Zea mays] gi|195615000|gb|ACG29330.1|
           transposon protein [Zea mays]
          Length = 768

 Score =  100 bits (248), Expect = 2e-19
 Identities = 51/113 (45%), Positives = 75/113 (66%), Gaps = 3/113 (2%)
 Frame = -2

Query: 485 PSLCKLGWSEFNEFVKTIETIQPLKSDLDNYLEEGCFISEDPRAFDALEWWKVNTLKYRI 306
           PS    G  +F+ ++  I++ QP K DL+ YLEE   ++   + FD L WWK+NTLK+  
Sbjct: 637 PSSTGDGLLDFDMYLSEIQSTQPAKCDLEQYLEES--LTPRIQEFDILNWWKLNTLKFPT 694

Query: 305 LSKMARDILVIPITTVASEATFSACG---RVIDTYRASLSSETVQVLLCGEDW 156
           LSKMARDIL IP++ V+S ++  + G   R++D YR+SL  ETV+ L+C +DW
Sbjct: 695 LSKMARDILAIPMSMVSSGSSIFSAGTGNRMLDDYRSSLRPETVEALVCAKDW 747


>ref|XP_002329012.1| predicted protein [Populus trichocarpa] gi|222839683|gb|EEE78006.1|
            predicted protein [Populus trichocarpa]
          Length = 1099

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 57/125 (45%), Positives = 76/125 (60%), Gaps = 2/125 (1%)
 Frame = -2

Query: 467  GWSEFNEFVKTIETIQPLKSDLDNYLEEGCFISEDPRA--FDALEWWKVNTLKYRILSKM 294
            G S+F+ ++  I + Q LKS+LD YLEE       PR   FD + WWK+N LKY  LSKM
Sbjct: 975  GLSDFDIYISEITSGQHLKSELDQYLEESLL----PRVHEFDVVGWWKLNRLKYPTLSKM 1030

Query: 293  ARDILVIPITTVASEATFSACGRVIDTYRASLSSETVQVLLCGEDWCRSLHGIRRKNKEK 114
            A DIL IP++TVA ++ F    R ID+YR SL   T++ L+C +DW +  HG    +   
Sbjct: 1031 AADILSIPVSTVAPDSVFDTENRKIDSYRGSLLPITLEALVCAKDWLQ--HG---SSLSS 1085

Query: 113  KSLEI 99
             SLEI
Sbjct: 1086 SSLEI 1090


>ref|XP_002455637.1| hypothetical protein SORBIDRAFT_03g015311 [Sorghum bicolor]
           gi|241927612|gb|EES00757.1| hypothetical protein
           SORBIDRAFT_03g015311 [Sorghum bicolor]
          Length = 558

 Score = 98.2 bits (243), Expect = 9e-19
 Identities = 43/106 (40%), Positives = 74/106 (69%)
 Frame = -2

Query: 464 WSEFNEFVKTIETIQPLKSDLDNYLEEGCFISEDPRAFDALEWWKVNTLKYRILSKMARD 285
           W++F + +   +  + +KS+LD YL++  F  +  + FD L+WW++++ KY ++S+MARD
Sbjct: 450 WADFEQHLAA-QKRKRVKSELDTYLQDDLFPRQ--KKFDILQWWRIHSTKYPVVSRMARD 506

Query: 284 ILVIPITTVASEATFSACGRVIDTYRASLSSETVQVLLCGEDWCRS 147
           +L  P +TVASE+ FS  GR++  YR+ L+S+ VQ L+C +DW R+
Sbjct: 507 VLAAPASTVASESAFSTSGRIVSDYRSRLTSKRVQALVCLQDWLRA 552


>emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]
          Length = 1045

 Score = 98.2 bits (243), Expect = 9e-19
 Identities = 49/107 (45%), Positives = 69/107 (64%), Gaps = 2/107 (1%)
 Frame = -2

Query: 461  SEFNEFVKTIETIQPLKSDLDNYLEEGCFISEDPRA--FDALEWWKVNTLKYRILSKMAR 288
            S+F+ ++  I   Q ++S+LD YL+E       PR+  FD L WWK+N LKY  LS+MA 
Sbjct: 926  SDFDVYISEISGGQDMRSELDQYLDESLM----PRSQDFDVLAWWKLNKLKYPTLSRMAS 981

Query: 287  DILVIPITTVASEATFSACGRVIDTYRASLSSETVQVLLCGEDWCRS 147
            DIL IPITTV  +  F   GR ID+YR+SL   T++ L+C +DW ++
Sbjct: 982  DILSIPITTVGPDNVFDTVGRKIDSYRSSLRPVTLEALICAKDWLQN 1028


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