BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037305
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containi...   144   7e-33
ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   139   2e-31
ref|XP_002322762.1| predicted protein [Populus trichocarpa] gi|2...   131   5e-29
gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygr...   129   2e-28
ref|XP_002323422.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28

>ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 580

 Score =  144 bits (363), Expect = 7e-33
 Identities = 67/109 (61%), Positives = 88/109 (80%)
 Frame = -2

Query: 329 VDVVLSTSLVDMYSKCGSLDDALKVFERMVKRDVTAWSAMIGGCAVHGYCEKALELYNKM 150
           +DVVL T+LV MYSKCGSLD+ALKVF+ M +RDVTAWS MI G A+HG+ EKAL+L++ M
Sbjct: 241 IDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAM 300

Query: 149 IKANVCPNSVTFTNVLFACSHSGLVDEGCKLFDIMQLEYGIEPELEHYG 3
            ++   PN VTFT+VL ACSHSGLV++G ++F+ M  EY I P+++HYG
Sbjct: 301 KRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYG 349



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/94 (31%), Positives = 50/94 (53%)
 Frame = -2

Query: 317 LSTSLVDMYSKCGSLDDALKVFERMVKRDVTAWSAMIGGCAVHGYCEKALELYNKMIKAN 138
           L   L+ +Y+ CG +D A  +F+ M + D  +WS M+ G A +G   +AL+L+ +M   N
Sbjct: 144 LVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAEN 203

Query: 137 VCPNSVTFTNVLFACSHSGLVDEGCKLFDIMQLE 36
           V  ++ T  +V+  C   G +D G  +   M  E
Sbjct: 204 VSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKE 237


>ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Vitis vinifera]
          Length = 540

 Score =  139 bits (350), Expect = 2e-31
 Identities = 65/109 (59%), Positives = 87/109 (79%)
 Frame = -2

Query: 329 VDVVLSTSLVDMYSKCGSLDDALKVFERMVKRDVTAWSAMIGGCAVHGYCEKALELYNKM 150
           +DVVL T+LV MYSKCGSLD+ALKVF+ M +RDVT WS MI G A+HG+ EKAL+L++ M
Sbjct: 201 IDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKALQLFDAM 260

Query: 149 IKANVCPNSVTFTNVLFACSHSGLVDEGCKLFDIMQLEYGIEPELEHYG 3
            ++ + PN VTFT+VL A SHSGLV++G ++F+ M  EY I P+++HYG
Sbjct: 261 KRSKIIPNCVTFTSVLSAYSHSGLVEKGHQIFETMWTEYKITPQIKHYG 309



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/84 (30%), Positives = 46/84 (54%)
 Frame = -2

Query: 317 LSTSLVDMYSKCGSLDDALKVFERMVKRDVTAWSAMIGGCAVHGYCEKALELYNKMIKAN 138
           L   L+ +Y+ CG +D A  +F+ M + D  +WS M+ G + +G   + L+L  +M   N
Sbjct: 104 LLNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYSQNGQAVETLKLLREMQAEN 163

Query: 137 VCPNSVTFTNVLFACSHSGLVDEG 66
           V  ++ T  +V+  C   G++D G
Sbjct: 164 VSSDAFTLASVVGVCGDLGVLDLG 187


>ref|XP_002322762.1| predicted protein [Populus trichocarpa] gi|222867392|gb|EEF04523.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score =  131 bits (330), Expect = 5e-29
 Identities = 58/109 (53%), Positives = 83/109 (76%)
 Frame = -2

Query: 329 VDVVLSTSLVDMYSKCGSLDDALKVFERMVKRDVTAWSAMIGGCAVHGYCEKALELYNKM 150
           V+++L T+LVDMY++CGS+D A+ VF+++  RD  +W+ +I G A+HGY EKALE +++M
Sbjct: 278 VNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRM 337

Query: 149 IKANVCPNSVTFTNVLFACSHSGLVDEGCKLFDIMQLEYGIEPELEHYG 3
            KA + P  +TFT VL ACSH GLV+ G +LF+ M+ +Y IEP LEHYG
Sbjct: 338 EKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYG 386



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 32/93 (34%), Positives = 54/93 (58%)
 Frame = -2

Query: 329 VDVVLSTSLVDMYSKCGSLDDALKVFERMVKRDVTAWSAMIGGCAVHGYCEKALELYNKM 150
           +DVV  TS+V  Y K G +  A K+F++M ++++  WS MI G A + + +KA+ELY  +
Sbjct: 177 LDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLL 236

Query: 149 IKANVCPNSVTFTNVLFACSHSGLVDEGCKLFD 51
               V  N     +V+ +C+H G ++ G +  D
Sbjct: 237 QSEGVHANETVMVSVIASCAHLGALELGERAHD 269


>gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  129 bits (325), Expect = 2e-28
 Identities = 61/108 (56%), Positives = 81/108 (75%)
 Frame = -2

Query: 329 VDVVLSTSLVDMYSKCGSLDDALKVFERMVKRDVTAWSAMIGGCAVHGYCEKALELYNKM 150
           +DV L ++LV MY+KCGS+DDA  VF +M +R+V AW+AMI GCA HG C +ALE + +M
Sbjct: 432 LDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQM 491

Query: 149 IKANVCPNSVTFTNVLFACSHSGLVDEGCKLFDIMQLEYGIEPELEHY 6
            K  + P+ VTFT+VL AC+H GLV+EG K F  M L+YGI+P +EHY
Sbjct: 492 KKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHY 539



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/99 (38%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
 Frame = -2

Query: 317 LSTSLVDMYSKCGSLDDALKVFERMVKRDVTAWSAMIGGCAVHGYCEKALELYNKMIKAN 138
           + TSLV MY+KCG +  A  +F+++ +++V  W+ +I G A  G  + ALEL  KM +A 
Sbjct: 234 VGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAE 293

Query: 137 VCPNSVTFTNVLFACSHSGLVDEGCKLFD-IMQLEYGIE 24
           V PN +T+T++L  C+    ++ G K+   I+Q  YG E
Sbjct: 294 VAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGRE 332



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/87 (35%), Positives = 55/87 (63%)
 Frame = -2

Query: 326 DVVLSTSLVDMYSKCGSLDDALKVFERMVKRDVTAWSAMIGGCAVHGYCEKALELYNKMI 147
           ++ +  +L+ MY KCG L +A K+F  +  RDV  W+AM+ G A  G+ ++A++L+ +M 
Sbjct: 332 EIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQ 391

Query: 146 KANVCPNSVTFTNVLFACSHSGLVDEG 66
           +  + P+ +TFT+ L +CS    + EG
Sbjct: 392 QQGIKPDKMTFTSALTSCSSPAFLQEG 418



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
 Frame = -2

Query: 317 LSTSLVDMYSKCGSLDDALKVFERMVKRDVTAWSAMIGGCAVHGYCEKALELYNKMIKAN 138
           L  +L+ MY+KCGSL DA +VF+ +  R++ +W+AMI          +A + Y  M  A 
Sbjct: 133 LENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAG 192

Query: 137 VCPNSVTFTNVLFACSHSGLVDEGCKL-FDIMQLEYGIEPEL 15
             P+ VTF ++L A ++  L+  G K+  +I +    +EP +
Sbjct: 193 CKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRV 234


>ref|XP_002323422.1| predicted protein [Populus trichocarpa] gi|222868052|gb|EEF05183.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score =  128 bits (322), Expect = 4e-28
 Identities = 51/108 (47%), Positives = 84/108 (77%)
 Frame = -2

Query: 329 VDVVLSTSLVDMYSKCGSLDDALKVFERMVKRDVTAWSAMIGGCAVHGYCEKALELYNKM 150
           +DV L T+++DMY+KCGS+D + ++F+RM +++V +WSAMIG    HG   +ALEL++ M
Sbjct: 235 LDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMM 294

Query: 149 IKANVCPNSVTFTNVLFACSHSGLVDEGCKLFDIMQLEYGIEPELEHY 6
           + + + PN +TF ++L+ACSH+GLVD+G +LF +M + YG+ P+++HY
Sbjct: 295 LNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHY 342



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/106 (30%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
 Frame = -2

Query: 329 VDVVLSTSLVDMYSKCGSLDDALKVFERMVKRDVTAWSAMIGGCAVHGYCEKALELYNKM 150
           +D  + ++LVDMY+KCG +D+A ++F+RM K+D+   + MI G A  G   ++  L+++M
Sbjct: 134 LDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQM 193

Query: 149 IKANVCPNSVTFTNVLFACSHSGLVDEGCKLFD-IMQLEYGIEPEL 15
            +    P+ V    ++ AC+  G +++   + D +    Y ++ EL
Sbjct: 194 RRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVEL 239