BLASTX nr result

ID: Bupleurum21_contig00037295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037295
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302346.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002514048.1| DNA binding protein, putative [Ricinus commu...    62   4e-08
ref|XP_002283801.2| PREDICTED: uncharacterized protein LOC100245...    58   7e-07
emb|CBI19274.3| unnamed protein product [Vitis vinifera]               58   7e-07
emb|CAN60243.1| hypothetical protein VITISV_010188 [Vitis vinifera]    58   7e-07

>ref|XP_002302346.1| predicted protein [Populus trichocarpa] gi|222844072|gb|EEE81619.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/75 (48%), Positives = 47/75 (62%)
 Frame = -2

Query: 227 VKVLTASGLPSKSIVPKGLTATAPMTKNMPNGKSTKAPPKSLQHSSFVDGTNHTVPVSTQ 48
           VKVL ASGLPS S  P   T  AP+T N+PNG+S +A  ++ Q S  + G N  VPVS Q
Sbjct: 117 VKVLIASGLPSDSTHPNNTTVEAPLTINIPNGRSLRATSENSQ-SDVMRGVNIRVPVSVQ 175

Query: 47  KQTLPAVTTAERLDI 3
           K +LPAV +    ++
Sbjct: 176 KLSLPAVMSCPASEV 190


>ref|XP_002514048.1| DNA binding protein, putative [Ricinus communis]
           gi|223547134|gb|EEF48631.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 608

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/74 (48%), Positives = 46/74 (62%)
 Frame = -2

Query: 227 VKVLTASGLPSKSIVPKGLTATAPMTKNMPNGKSTKAPPKSLQHSSFVDGTNHTVPVSTQ 48
           VKVL ASG  S S  P   T  AP+T N+PNG+S +A  ++ Q ++ + G N TVPVS Q
Sbjct: 118 VKVLIASGATSDSTHPNSATVEAPLTINIPNGQSARAISENSQPAT-MRGMNITVPVSIQ 176

Query: 47  KQTLPAVTTAERLD 6
           KQ LP V + E  D
Sbjct: 177 KQPLPTVASTEVFD 190


>ref|XP_002283801.2| PREDICTED: uncharacterized protein LOC100245507 [Vitis vinifera]
          Length = 606

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/61 (49%), Positives = 40/61 (65%)
 Frame = -2

Query: 227 VKVLTASGLPSKSIVPKGLTATAPMTKNMPNGKSTKAPPKSLQHSSFVDGTNHTVPVSTQ 48
           VKVL AS LPS S +P      AP+T N+P G+S++AP +  + S  + GTN T+PVS Q
Sbjct: 116 VKVLIASSLPSDSSLPNSSMVEAPLTINIPCGQSSRAPSEYSRLSGSMQGTNITIPVSVQ 175

Query: 47  K 45
           K
Sbjct: 176 K 176


>emb|CBI19274.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/61 (49%), Positives = 40/61 (65%)
 Frame = -2

Query: 227 VKVLTASGLPSKSIVPKGLTATAPMTKNMPNGKSTKAPPKSLQHSSFVDGTNHTVPVSTQ 48
           VKVL AS LPS S +P      AP+T N+P G+S++AP +  + S  + GTN T+PVS Q
Sbjct: 116 VKVLIASSLPSDSSLPNSSMVEAPLTINIPCGQSSRAPSEYSRLSGSMQGTNITIPVSVQ 175

Query: 47  K 45
           K
Sbjct: 176 K 176


>emb|CAN60243.1| hypothetical protein VITISV_010188 [Vitis vinifera]
          Length = 598

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/61 (49%), Positives = 40/61 (65%)
 Frame = -2

Query: 227 VKVLTASGLPSKSIVPKGLTATAPMTKNMPNGKSTKAPPKSLQHSSFVDGTNHTVPVSTQ 48
           VKVL AS LPS S +P      AP+T N+P G+S++AP +  + S  + GTN T+PVS Q
Sbjct: 79  VKVLIASSLPSDSSLPNSSMVEAPLTINIPCGQSSRAPSEYSRLSGSMQGTNITIPVSVQ 138

Query: 47  K 45
           K
Sbjct: 139 K 139


Top